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We propose a deep self-learning algorithm to learn the manifold structure of free-breathing and ungated cardiac data and to recover the cardiac CINE MRI from highly undersampled measurements. Our method learns the manifold structure in the…

Image and Video Processing · Electrical Eng. & Systems 2019-11-07 Abdul Haseeb Ahmed , Hemant Aggarwal , Prashant Nagpal , Mathews Jacob

Learning 3D+t shape completion and generation from multi-view cardiac magnetic resonance (CMR) images requires a large amount of high-resolution 3D whole-heart segmentations (WHS) to capture shape priors. In this work, we leverage flow…

Image and Video Processing · Electrical Eng. & Systems 2025-09-09 Qiang Ma , Qingjie Meng , Mengyun Qiao , Paul M. Matthews , Declan P. O'Regan , Wenjia Bai

Purpose: To study the accuracy of motion information extracted from beat-to-beat 3D image-based navigators (3D iNAVs) collected using a variable-density cones trajectory with different combinations of spatial resolutions and scan…

Tracking organ motion is important in image-guided interventions, but motion annotations are not always easily available. Thus, we propose Repetitive Motion Estimation Network (RMEN) to recover cardiac and respiratory signals. It learns the…

Computer Vision and Pattern Recognition · Computer Science 2018-11-09 Xiaoxiao Li , Vivek Singh , Yifan Wu , Klaus Kirchberg , James Duncan , Ankur Kapoor

4D Computed Tomography (4DCT) is widely used for many clinical applications such as radiotherapy treatment planning, PET and ventilation imaging. However, common 4DCT methods reconstruct multiple breath cycles into a single, arbitrary…

Computer Vision and Pattern Recognition · Computer Science 2024-07-02 Yuliang Huang , Bjoern Eiben , Kris Thielemans , Jamie R. McClelland

PURPOSE: Real-time assessment of ventricular volumes requires high acceleration factors. Residual convolutional neural networks (CNN) have shown potential for removing artifacts caused by data undersampling. In this study we investigated…

Computer Vision and Pattern Recognition · Computer Science 2020-09-07 Andreas Hauptmann , Simon Arridge , Felix Lucka , Vivek Muthurangu , Jennifer A. Steeden

Intracardiac flow patterns are shaped by the coupled motion of the cardiac chambers and heart valves and provide important information about cardiac function. However, clinical flow imaging remains limited by exam times, noise, resolution,…

Image and Video Processing · Electrical Eng. & Systems 2026-05-12 Fanwei Kong , Aaron Brown , Michael Loecher , Perry S. Choi , Lei Shi , Michael Ma , Daniel B. Ennis , Alison Marsden

Motion artefacts created by patient motion during an MRI scan occur frequently in practice, often rendering the scans clinically unusable and requiring a re-scan. While many methods have been employed to ameliorate the effects of patient…

Image and Video Processing · Electrical Eng. & Systems 2020-06-30 Michael Rotman , Rafi Brada , Israel Beniaminy , Sangtae Ahn , Christopher J. Hardy , Lior Wolf

This paper develops a new vascular respiratory motion compensation algorithm, Motion-Related Compensation (MRC), to conduct vascular respiratory motion compensation by extrapolating the correlation between invisible vascular and visible…

Robotics · Computer Science 2023-09-01 Keke Yang , Zheng Zhang , Meng Li , Tuoyu Cao , Maani Ghaffari , Jingwei Song

Background: Conventional cardiovascular magnetic resonance (CMR) in paediatric and congenital heart disease uses 2D, breath-hold, balanced steady state free precession (bSSFP) cine imaging for assessment of function and cardiac-gated,…

Image and Video Processing · Electrical Eng. & Systems 2025-07-01 Mark Wrobel , Michele Pascale , Tina Yao , Ruaraidh Campbell , Elena Milano , Michael Quail , Jennifer Steeden , Vivek Muthurangu

In this work we reduce undersampling artefacts in two-dimensional ($2D$) golden-angle radial cine cardiac MRI by applying a modified version of the U-net. We train the network on $2D$ spatio-temporal slices which are previously extracted…

Image and Video Processing · Electrical Eng. & Systems 2019-08-14 Andreas Kofler , Marc Dewey , Tobias Schaeffter , Christian Wald , Christoph Kolbitsch

Accurate cardiac motion estimation from cine cardiac magnetic resonance (CMR) images is vital for assessing cardiac function and detecting its abnormalities. Existing methods often struggle to capture heart motion accurately because they…

Computer Vision and Pattern Recognition · Computer Science 2025-08-29 Reza Akbari Movahed , Abuzar Rezaee , Arezoo Zakeri , Colin Berry , Edmond S. L. Ho , Ali Gooya

Magnetic resonance imaging is capable of producing volumetric images without ionizing radiation. Nonetheless, long acquisitions lead to prohibitively long exams. Compressed sensing (CS) can enable faster scanning via sub-sampling with…

Segmenting anatomical structures in medical images has been successfully addressed with deep learning methods for a range of applications. However, this success is heavily dependent on the quality of the image that is being segmented. A…

Image and Video Processing · Electrical Eng. & Systems 2020-07-06 Ilkay Oksuz , James R. Clough , Bram Ruijsink , Esther Puyol Anton , Aurelien Bustin , Gastao Cruz , Claudia Prieto , Andrew P. King , Julia A. Schnabel

Bronchoscopic navigation relies on registering endoscopic video to a preoperative CT scan, but respiratory motion deforms the airway by 5-20 mm, creating CT-to-body divergence that limits localization accuracy. In practice, this is…

Computer Vision and Pattern Recognition · Computer Science 2026-05-01 Andrea Dunn Beltran , Daniel Rho , Aarav Mehta , Xinqi Xiong , Raúl San José Estépar , Ron Alterovitz , Marc Niethammer , Roni Sengupta

Cardiac magnetic resonance imaging (CMR) is vital for diagnosing heart diseases, but long scan time remains a major drawback. To address this, accelerated imaging techniques have been introduced by undersampling k-space, which reduces the…

Computer Vision and Pattern Recognition · Computer Science 2025-02-24 Donghang Lyu , Chinmay Rao , Marius Staring , Matthias J. P. van Osch , Mariya Doneva , Hildo J. Lamb , Nicola Pezzotti

We introduce an unsupervised motion-compensated reconstruction scheme for high-resolution free-breathing pulmonary MRI. We model the image frames in the time series as the deformed version of the 3D template image volume. We assume the…

Image and Video Processing · Electrical Eng. & Systems 2022-07-13 Qing Zou , Luis A. Torres , Sean B. Fain , Nara S. Higano , Alister J. Bates , Mathews Jacob

Real-time magnetic resonance imaging (MRI) methods generally shorten the measuring time by acquiring less data than needed according to the sampling theorem. In order to obtain a proper image from such undersampled data, the reconstruction…

Numerical Analysis · Mathematics 2013-12-05 Housen Li , Markus Haltmeier , Shuo Zhang , Jens Frahm , Axel Munk

2D cine phase contrast (CPC) MRI provides quantitative information on blood velocity and flow within the human vasculature. However, data acquisition is time-consuming, motivating the reconstruction of the velocity field from undersampled…

Image and Video Processing · Electrical Eng. & Systems 2026-01-21 Pablo Arratia , Martin J. Graves , Mary McLean , Carolin Pirkl , Carola-Bibiane Schönlieb , Timo Schirmer , Florian Wiesinger , Matthias J. Ehrhardt

Accurate segmentation of heart structures imaged by cardiac MR is key for the quantitative analysis of pathology. High-resolution 3D MR sequences enable whole-heart structural imaging but are time-consuming, expensive to acquire and they…

Computer Vision and Pattern Recognition · Computer Science 2019-03-01 Carlo Biffi , Juan J. Cerrolaza , Giacomo Tarroni , Antonio de Marvao , Stuart A. Cook , Declan P. O'Regan , Daniel Rueckert