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Purpose: We aim to develop a robust 4D MRI method for large FOVs enabling the extraction of irregular respiratory motion that is readily usable with all MRI machines and thus applicable to support a wide range of interventional settings.…

Image and Video Processing · Electrical Eng. & Systems 2020-09-09 Gino Gulamhussene , Fabian Joeres , Marko Rak , Maciej Pech , Christian Hansen

Motion remains a major challenge in magnetic resonance (MR) imaging, particularly in free-breathing cardiac MR imaging, where data are acquired over multiple heartbeats at varying respiratory phases. We adopt a model-based approach for…

Image and Video Processing · Electrical Eng. & Systems 2025-01-29 Kwang Eun Jang , Mario O. Malavé , Dwight G. Nishimura

Joint 2D cardiac segmentation and 3D volume reconstruction are fundamental to building statistical cardiac anatomy models and understanding functional mechanisms from motion patterns. However, due to the low through-plane resolution of cine…

Computer Vision and Pattern Recognition · Computer Science 2022-06-16 Qi Chang , Zhennan Yan , Mu Zhou , Di Liu , Khalid Sawalha , Meng Ye , Qilong Zhangli , Mikael Kanski , Subhi Al Aref , Leon Axel , Dimitris Metaxas

Cardiac Magnetic Resonance (CMR) imaging serves as the gold-standard for evaluating cardiac morphology and function. Typically, a multi-view CMR stack, covering short-axis (SA) and 2/3/4-chamber long-axis (LA) views, is acquired for a…

Image and Video Processing · Electrical Eng. & Systems 2025-07-03 Yundi Zhang , Chen Chen , Suprosanna Shit , Sophie Starck , Daniel Rueckert , Jiazhen Pan

Computational models of cardiac structure and function are increasingly central to the development of subject-specific cardiac digital twins, enabling improved characterization of contractile dysfunction, pathological remodeling, and…

Data-driven respiratory signal extraction from rotational X-ray scans is a challenge as angular effects overlap with respiration-induced change in the scene. In this paper, we use the linearity of the X-ray transform to propose a bilinear…

Computer Vision and Pattern Recognition · Computer Science 2018-11-06 Tobias Geimer , Paul Keall , Katharina Breininger , Vincent Caillet , Michelle Dunbar , Christoph Bert , Andreas Maier

In this paper, we develop a 2D and 3D segmentation pipelines for fully automated cardiac MR image segmentation using Deep Convolutional Neural Networks (CNN). Our models are trained end-to-end from scratch using the ACD Challenge 2017…

Computer Vision and Pattern Recognition · Computer Science 2017-08-01 Jay Patravali , Shubham Jain , Sasank Chilamkurthy

Phase-contrast magnetic resonance imaging (MRI) provides time-resolved quantification of blood flow dynamics that can aid clinical diagnosis. Long in vivo scan times due to repeated three-dimensional (3D) volume sampling over cardiac phases…

Image and Video Processing · Electrical Eng. & Systems 2020-04-22 Valery Vishnevskiy , Jonas Walheim , Sebastian Kozerke

We introduce a novel bandlimited manifold framework and an algorithm to recover freebreathing and ungated cardiac MR images from highly undersampled measurements. The image frames in the free breathing and ungated dataset are assumed to be…

Computer Vision and Pattern Recognition · Computer Science 2018-02-27 Sunrita Poddar , Yasir Mohsin , Deidra Ansah , Bijoy Thattaliyath , Ravi Ashwath , Mathews Jacob

Accelerated Magnetic Resonance Imaging (MRI) requires careful optimization of k-space sampling patterns to balance acquisition speed and image quality. While recent advances in deep learning have shown promise in optimizing Cartesian…

Tissues and Organs · Quantitative Biology 2025-08-15 Ruru Xu , Ilkay Oksuz

Purpose: To develop a framework to reconstruct large-scale volumetric dynamic MRI from rapid continuous and non-gated acquisitions, with applications to pulmonary and dynamic contrast enhanced (DCE) imaging. Theory and Methods: The problem…

The quality of cardiac magnetic resonance (CMR) imaging is susceptible to respiratory motion artifacts. The model robustness of automated segmentation techniques in face of real-world respiratory motion artifacts is unclear. This manuscript…

Image and Video Processing · Electrical Eng. & Systems 2022-10-13 Shuo Wang , Chen Qin , Chengyan Wang , Kang Wang , Haoran Wang , Chen Chen , Cheng Ouyang , Xutong Kuang , Chengliang Dai , Yuanhan Mo , Zhang Shi , Chenchen Dai , Xinrong Chen , He Wang , Wenjia Bai

Cardiac MRI is limited by long acquisition times, which can lead to patient discomfort and motion artifacts. We aim to accelerate Cartesian dynamic cardiac MRI by learning efficient, scan-adaptive undersampling patterns that preserve…

Image and Video Processing · Electrical Eng. & Systems 2026-02-24 Siddhant Gautam , Angqi Li , Prachi P. Agarwal , Anil K. Attili , Jeffrey A. Fessler , Nicole Seiberlich , Saiprasad Ravishankar

In the clinical routine, short axis (SA) cine cardiac MR (CMR) image stacks are acquired during multiple subsequent breath-holds. If the patient cannot consistently hold the breath at the same position, the acquired image stack will be…

Computer Vision and Pattern Recognition · Computer Science 2018-10-05 Giacomo Tarroni , Ozan Oktay , Matthew Sinclair , Wenjia Bai , Andreas Schuh , Hideaki Suzuki , Antonio de Marvao , Declan O'Regan , Stuart Cook , Daniel Rueckert

We propose a novel respiratory motion-resolved MR image reconstruction method that jointly treats multi-echo k-space raw data. Continuously acquired non-Cartesian multi-echo/multi-coil k-space data with free breathing are sorted/binned into…

Image and Video Processing · Electrical Eng. & Systems 2023-04-05 Youngwook Kee , MungSoo Kang , Seongho Jeong , Gerald Behr

Ultrasound (US) imaging is widely used in diagnosing and staging abdominal diseases due to its lack of non-ionizing radiation and prevalent availability. However, significant inter-operator variability and inconsistent image acquisition…

Robotics · Computer Science 2024-10-28 Yordanka Velikova , Mohammad Farid Azampour , Walter Simson , Marco Esposito , Nassir Navab

The acquisition of Magnetic Resonance Imaging (MRI) is inherently slow. Inspired by recent advances in deep learning, we propose a framework for reconstructing MR images from undersampled data using a deep cascade of convolutional neural…

Computer Vision and Pattern Recognition · Computer Science 2017-03-03 Jo Schlemper , Jose Caballero , Joseph V. Hajnal , Anthony Price , Daniel Rueckert

Free-breathing cardiac MRI schemes are emerging as competitive alternatives to breath-held cine MRI protocols, enabling applicability to pediatric and other population groups that cannot hold their breath. Because the data from the slices…

Image and Video Processing · Electrical Eng. & Systems 2021-11-23 Qing Zou , Abdul Haseeb Ahmed , Prashant Nagpal , Sarv Priya , Rolf F Schulte , Mathews Jacob

Cine cardiac MRI is routinely acquired for the assessment of cardiac health, but the imaging process is slow and typically requires several breath-holds to acquire sufficient k-space profiles to ensure good image quality. Several…

Magnetic resonance imaging (MRI) is highly susceptible to patient motion due to its relatively long acquisition times and the fact that data are acquired sequentially in k-space. Even small patient movements introduce phase inconsistencies…

Computer Vision and Pattern Recognition · Computer Science 2026-05-22 Antonio Ortiz-Gonzalez , Erich Kobler , Lukas Schletter , Alexander Effland