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Widely used models in genetics include the Wright-Fisher diffusion and its moment dual, Kingman's coalescent. Each has a multilocus extension but under neither extension is the sampling distribution available in closed-form, and their…

Probability · Mathematics 2015-06-24 Paul A. Jenkins , Paul Fearnhead , Yun S. Song

Boundary conditions in confined geometries and measurement interactions in quantum mechanics share a common structural role: both select a preferred basis by determining which states are compatible with the imposed constraint. This paper…

Quantum Physics · Physics 2026-01-01 Mustafa Bakr

We study continuous-time (variable speed) random walks in random environments on $\mathbb{Z}^d$, $d\ge2$, where, at time $t$, the walk at $x$ jumps across edge $(x,y)$ at time-dependent rate $a_t(x,y)$. The rates, which we assume stationary…

Probability · Mathematics 2020-01-06 Marek Biskup , Pierre-François Rodriguez

For a random walk defined for a doubly infinite sequence of times, we let the time parameter itself be an integer-valued process, and call the orginal process a random walk at random time. We find the scaling limit which generalizes the…

Probability · Mathematics 2013-07-30 Paul Jung , Greg Markowsky

We consider a new model of a branching random walk on a multidimensional lattice with continuous time and one source of particle reproduction and death, as well as an infinite number of sources in which, in addition to the walk, only…

Probability · Mathematics 2023-02-14 E. Filichkina , E. Yarovaya

We consider a meanfield system of interacting Fisher-Wright diffusions with selection and rare mutation on the geographic space $\{1,2,...,N\}$. The type 1 has fitness 0, type 2 has fitness 1 and (rare) mutation occurs from type 1 to 2 at…

Probability · Mathematics 2011-04-05 Donald A. Dawson , Andreas Greven

We establish the incompressible limit of weakly asymmetric simple exclusion processes coupled through particle collisions. The incompressible limit depends on various parameters in the particle system and is linked to fluid dynamics…

Probability · Mathematics 2024-11-13 Patrick van Meurs , Kenkichi Tsunoda , Lu Xu

We consider a one-dimensional simple symmetric exclusion process in equilibrium, constituting a dynamic random environment for a nearest-neighbor random walk that on occupied/vacant sites has two different local drifts to the right. We…

Probability · Mathematics 2012-02-28 Luca Avena , Renato dos Santos , Florian Völlering

We derive an analytical expression for the transition path time (TPT) distribution for a one-dimensional particle crossing a parabolic barrier. The solution is expressed in terms of the eigenfunctions and eigenvalues of the associated…

Statistical Mechanics · Physics 2018-12-10 Michele Caraglio , Stefanie Put , Enrico Carlon , Carlo Vanderzande

We investigate a novel variant of the exclusion process in which particles perform asymmetric nearest-neighbor jumps across a bond \((k, k+1)\) only if the preceding site \((k-1)\) is unoccupied. This next-nearest-neighbor constraint…

Statistical Mechanics · Physics 2025-09-19 Gunter Schutz , Ali Zahra

The random motion of molecules in living cells has consistently been reported to deviate from standard Brownian motion, a behavior coined as ``anomalous diffusion''. Fluorescence Correlation Spectroscopy (FCS) is a powerful method to…

Quantitative Methods · Quantitative Biology 2024-07-18 Nathan Quiblier , Jan-Michael Rye , Pierre Leclerc , Henri Truong , Abdelkrim Hannou , Laurent Héliot , Hugues Berry

We formulate the weak intramolecular coupling F\"orster resonance energy transfer theory in a form suitable for calculating ultrafast nonlinear response of molecular systems. We introduce a formally exact time-dependent factorization of the…

The increasing availability of population-level allele frequency data across one or more related populations necessitates the development of methods that can efficiently estimate population genetics parameters, such as the strength of…

Computation · Statistics 2017-11-09 Jeffrey J. Gory , Radu Herbei , Laura S. Kubatko

We consider a new type of lookdown processes where spatial motion of each individual is influenced by an individual noise and a common noise, which could be regarded as an environment. Then a class of probability measure-valued processes on…

Probability · Mathematics 2009-11-05 Hui He

We introduce a new class of nonparametric prior distributions on the space of continuously varying densities, induced by Dirichlet process mixtures which diffuse in time. These select time-indexed random functions without jumps, whose…

Methodology · Statistics 2016-02-10 Ramsés H. Mena , Matteo Ruggiero

We propose an approach to approximate the boundary crossing probabilities for general one-dimensional diffusion processes, and derive the convergence rate for this approximation scheme. There results are based on the explicit expression of…

Probability · Mathematics 2015-10-28 Jinghai Shao , Liqun Wang

Random walks on expanders play a crucial role in Markov Chain Monte Carlo algorithms, derandomization, graph theory, and distributed computing. A desirable property is that they are rapidly mixing, which is equivalent to having a spectral…

Probability · Mathematics 2024-12-18 Sam Olesker-Taylor , Thomas Sauerwald , John Sylvester

We study the flow induced by random vibration of a solid boundary in an otherwise quiescent fluid. The analysis is motivated by experiments conducted under the low level and random effective acceleration field that is typical of a…

Pattern Formation and Solitons · Physics 2019-09-25 Dmitri Volfson , Jorge Vinals

For certain materials science scenarios arising in rubber technology, one-dimensional moving boundary problems (MBPs) with kinetic boundary conditions are capable of unveiling the large-time behavior of the diffusants penetration front,…

Numerical Analysis · Mathematics 2023-12-04 Surendra Nepal , Magnus Ogren , Yosief Wondmagegne , Adrian Muntean

Finding the first time a fluctuating quantity reaches a given boundary is a deceptively simple-looking problem of vast practical importance in physics, biology, chemistry, neuroscience, economics and industry. Problems in which the bound to…

Neurons and Cognition · Quantitative Biology 2015-06-05 Thibaud Taillefumier , Marcelo O. Magnasco
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