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As Large Language Model (LLM) capabilities advance, the demand for high-quality annotation of exponentially increasing text corpora has outpaced human capacity, leading to the widespread adoption of LLMs in automatic evaluation and…

Computation and Language · Computer Science 2026-04-02 Jiayu Wang , Junyoung Lee

Data augmentation (DA) is a key factor in medical image analysis, such as in prostate cancer (PCa) detection on magnetic resonance images. State-of-the-art computer-aided diagnosis systems still rely on simplistic spatial transformations to…

Extracting, harvesting and building large-scale annotated radiological image datasets is a greatly important yet challenging problem. It is also the bottleneck to designing more effective data-hungry computing paradigms (e.g., deep…

Computer Vision and Pattern Recognition · Computer Science 2017-10-11 Ke Yan , Xiaosong Wang , Le Lu , Ronald M. Summers

Rich high-quality annotated data is critical for semantic segmentation learning, yet acquiring dense and pixel-wise ground-truth is both labor- and time-consuming. Coarse annotations (e.g., scribbles, coarse polygons) offer an economical…

Computer Vision and Pattern Recognition · Computer Science 2018-08-29 Yadan Luo , Ziwei Wang , Zi Huang , Yang Yang , Cong Zhao

Despite significant research efforts and advancements, cancer remains a leading cause of mortality. Early cancer prediction has become a crucial focus in cancer research to streamline patient care and improve treatment outcomes. Manual…

Computer Vision and Pattern Recognition · Computer Science 2024-08-19 Samta Rani , Tanvir Ahmad , Sarfaraz Masood , Chandni Saxena

The lack of well-structured annotations in a growing amount of RNA expression data complicates data interoperability and reusability. Commonly - used text mining methods extract annotations from existing unstructured data descriptions and…

Genomics · Quantitative Biology 2019-09-27 Jelena Fiosina , Maksims Fiosins , Stefan Bonn

A significant amount of data held in Oncology Electronic Medical Records (EMRs) is contained in unstructured provider notes -- including but not limited to the chemotherapy (or cancer treatment) outcome, different biomarkers, the tumor's…

The work discusses the use of machine learning algorithms for anomaly detection in medical image analysis and how the performance of these algorithms depends on the number of annotators and the quality of labels. To address the issue of…

Computer Vision and Pattern Recognition · Computer Science 2023-03-30 Hieu H. Pham , Khiem H. Le , Tuan V. Tran , Ha Q. Nguyen

The construction of high-quality parallel corpora for translation research has increasingly evolved from simple sentence alignment to complex, multi-layered annotation tasks. This methodological shift presents significant challenges for…

Computation and Language · Computer Science 2026-02-12 Baorong Huang , Ali Asiri

Cancer is a complex disease, the understanding and treatment of which are being aided through increases in the volume of collected data and in the scale of deployed computing power. Consequently, there is a growing need for the development…

Machine learning can precisely identify different cancer tumors at any stage by classifying cancerous and healthy samples based on their genomic profile. We have developed novel methods of MLAC (Machine Learning Against Cancer) achieving…

Genomics · Quantitative Biology 2020-09-15 Arash Hooshmand

The digitalization of stored information in hospitals now allows for the exploitation of medical data in text format, as electronic health records (EHRs), initially gathered for other purposes than epidemiology. Manual search and analysis…

Creating large-scale and well-annotated datasets to train AI algorithms is crucial for automated tumor detection and localization. However, with limited resources, it is challenging to determine the best type of annotations when annotating…

Computer Vision and Pattern Recognition · Computer Science 2024-02-21 Yu-Cheng Chou , Bowen Li , Deng-Ping Fan , Alan Yuille , Zongwei Zhou

We propose a new method that employs transfer learning techniques to effectively correct sampling selection errors introduced by sparse annotations during supervised learning for automated tumor segmentation. The practicality of current…

Artificial Intelligence (AI) has emerged as a valuable tool for assisting radiologists in breast cancer detection and diagnosis. However, the success of AI applications in this domain is restricted by the quantity and quality of available…

Computer Vision and Pattern Recognition · Computer Science 2024-05-31 Marta Buetas Arcas , Richard Osuala , Karim Lekadir , Oliver Díaz

Clinical oncology generates vast, unstructured data that often contain inconsistencies, missing information, and ambiguities, making it difficult to extract reliable insights for data-driven decision-making. General-purpose large language…

Computation and Language · Computer Science 2025-03-12 Morteza Rohanian , Tarun Mehra , Nicola Miglino , Farhad Nooralahzadeh , Michael Krauthammer , Andreas Wicki

Integrating textual data with imaging in liver tumor segmentation is essential for enhancing diagnostic accuracy. However, current multi-modal medical datasets offer only general text annotations, lacking lesion-specific details critical…

Image and Video Processing · Electrical Eng. & Systems 2024-11-08 Xiaoyan Jiang , Zhi Zhou , Hailing Wang , Guozhong Wang , Zhijun Fang

The vast majority of semantic segmentation approaches rely on pixel-level annotations that are tedious and time consuming to obtain and suffer from significant inter and intra-expert variability. To address these issues, recent approaches…

Microscopic examination of slides prepared from tissue samples is the primary tool for detecting and classifying cancerous lesions, a process that is time-consuming and requires the expertise of experienced pathologists. Recent advances in…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Saba Fatema , Brighton Nuwagira , Sayoni Chakraborty , Reyhan Gedik , Baris Coskunuzer

Considering the profound transformation affecting pathology practice, we aimed to develop a scalable artificial intelligence (AI) system to diagnose colorectal cancer from whole-slide images (WSI). For this, we propose a deep learning (DL)…