English
Related papers

Related papers: Deep Bayesian Local Crystallography

200 papers

We present an introduction to some concepts of Bayesian data analysis in the context of atomic physics. Starting from basic rules of probability, we present the Bayes' theorem and its applications. In particular we discuss about how to…

Data Analysis, Statistics and Probability · Physics 2024-01-30 Martino Trassinelli

The dynamics of learning in modern large AI systems is hierarchical, often characterized by abrupt, qualitative shifts akin to phase transitions observed in physical systems. While these phenomena hold promise for uncovering the mechanisms…

Machine Learning · Computer Science 2025-05-26 Liu Ziyin , Yizhou Xu , Tomaso Poggio , Isaac Chuang

Statistical learning algorithms are finding more and more applications in science and technology. Atomic-scale modeling is no exception, with machine learning becoming commonplace as a tool to predict energy, forces and properties of…

Chemical Physics · Physics 2020-12-09 Félix Musil , Michele Ceriotti

Classically, anisotropic surface wave tomography is treated as an optimisation problem where it proceeds through a linearised two-step approach. It involves the construction of 2D group or phase velocity maps for each considered period,…

Geophysics · Physics 2020-12-08 John Keith Magali

This study explores the application of Convolutional Autoencoders (CAEs) for analyzing and reconstructing Scanning Tunneling Microscopy (STM) images of various crystalline lattice structures. We developed two distinct CAE architectures to…

Numerical Analysis · Mathematics 2025-01-24 Peter Binev , Joshua Moorehead , Ayush Parambath , Luke Parrella , Rori Pumphrey , Miruna Savu

Electron, optical, and scanning probe microscopy methods are generating ever increasing volume of image data containing information on atomic and mesoscale structures and functionalities. This necessitates the development of the machine…

Machine Learning · Computer Science 2023-04-03 Mani Valleti , Yongtao Liu , Sergei Kalinin

A comprehensive artificial intelligence system needs to not only perceive the environment with different `senses' (e.g., seeing and hearing) but also infer the world's conditional (or even causal) relations and corresponding uncertainty.…

Machine Learning · Statistics 2021-01-07 Hao Wang , Dit-Yan Yeung

A routine crystallography technique, crystal structure analysis, is rarely performed in computational condensed matter research. The lack of methods to identify and characterize crystal structures reliably in particle simulation data…

Materials Science · Physics 2021-06-29 Michael Engel

Standard convolutions are prevalent in image processing and deep learning, but their fixed kernels limits adaptability. Several deformation strategies of the reference kernel grid have been proposed. Yet, they lack a unified theoretical…

Computer Vision and Pattern Recognition · Computer Science 2025-07-31 Thomas Dagès , Michael Lindenbaum , Alfred M. Bruckstein

Many remarkably robust, rapid and spontaneous self-assembly phenomena in nature can be modeled geometrically starting from a collection of rigid bunches of spheres. This paper highlights the role of symmetry in sphere-based assembly…

Combinatorics · Mathematics 2016-03-15 Meera Sitharam , Andrew Vince , Menghan Wang , Miklos Bona

The widespread adoption of machine learning surrogate models has significantly improved the scale and complexity of systems and processes that can be explored accurately and efficiently using atomistic modeling. However, the inherently…

Chemical Physics · Physics 2025-03-13 Federico Grasselli , Sanggyu Chong , Venkat Kapil , Silvia Bonfanti , Kevin Rossi

Extracting relevant information from atomistic simulations relies on a complete and accurate characterization of atomistic configurations. We present a framework for characterizing atomistic configurations in terms of a complete and…

Applied Physics · Physics 2024-02-07 Edward M. Kober , Jacob P. Tavenner , Colin M. Adams , Nithin Mathew

We explore the notion of spatial extent and structure, already alluded to in earlier literature, within the formulation of quantum mechanics on the noncommutative plane. Introducing the notion of average position and its measurement, we…

Mathematical Physics · Physics 2014-11-20 C M Rohwer , K G Zloshchastiev , L Gouba , F G Scholtz

Units equivariance (or units covariance) is the exact symmetry that follows from the requirement that relationships among measured quantities of physics relevance must obey self-consistent dimensional scalings. Here, we express this…

Machine Learning · Statistics 2023-06-26 Soledad Villar , Weichi Yao , David W. Hogg , Ben Blum-Smith , Bianca Dumitrascu

We introduce group crosscoders, an extension of crosscoders that systematically discover and analyse symmetrical features in neural networks. While neural networks often develop equivariant representations without explicit architectural…

Machine Learning · Computer Science 2024-11-04 Liv Gorton

Single molecule X-ray scattering experiments with free electron lasers have opened a new route to the structure determination of biomolecules. Because typically only very few photons per scattering image are recorded and thus the…

Computational Physics · Physics 2023-04-17 Steffen Schultze , Helmut Grubmüller

We have developed a symmetry-adapted modeling procedure for molecules and crystals. By using the completeness of multipoles to express spatial and time-reversal parity-specific anisotropic distributions, we can generate systematically the…

Materials Science · Physics 2023-05-12 Hiroaki Kusunose , Rikuto Oiwa , Satoru Hayami

Our understanding of supercooled liquids and glasses has lagged significantly behind that of simple liquids and crystalline solids. This is in part due to the many possibly relevant degrees of freedom that are present due to the disorder…

Machine Learning · Statistics 2018-08-01 Samuel S. Schoenholz

Precision spectroscopy has long played a central role in testing the foundations of physics, from the early insights that led to the development of quantum mechanics to the validation of quantum electrodynamics and the determination of…

High Energy Physics - Phenomenology · Physics 2026-02-26 Cédric Delaunay , Jean-Philippe Karr , Yotam Soreq

The past decade has seen a remarkable resurgence of the old programme of finding more or less a priori axioms for the mathematical framework of quantum mechanics. The new impetus comes largely from quantum information theory; in contrast to…

Quantum Physics · Physics 2015-05-05 Alexander Wilce