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Spatio-temporal epidemic forecasting is critical for public health management, yet existing methods often struggle with insensitivity to weak epidemic signals, over-simplified spatial relations, and unstable parameter estimation. To address…

Machine Learning · Computer Science 2026-05-22 Sijie Ruan , Jinyu Li , Jia Wei , Zenghao Xu , Jie Bao , Junshi Xu , Junyang Qiu , Shuliang Wang , Xiaoxiao Wang , Hanning Yuan

Objective: The COVID-19 pandemic has created many challenges that need immediate attention. Various epidemiological and deep learning models have been developed to predict the COVID-19 outbreak, but all have limitations that affect the…

Social and Information Networks · Computer Science 2020-12-08 Junyi Gao , Rakshith Sharma , Cheng Qian , Lucas M. Glass , Jeffrey Spaeder , Justin Romberg , Jimeng Sun , Cao Xiao

Time-series anomaly detection (TSAD) is critical in domains such as industrial monitoring, healthcare, and cybersecurity, but it remains challenging due to rare and heterogeneous anomalies and the scarcity of labelled data. This scarcity…

Machine Learning · Computer Science 2026-05-05 Romain Hermary , Samet Hicsonmez , Dan Pineau , Abd El Rahman Shabayek , Djamila Aouada

Epidemic modeling is an essential tool to understand the spread of the novel coronavirus and ultimately assist in disease prevention, policymaking, and resource allocation. In this article, we establish a state of the art interface between…

Applications · Statistics 2020-12-17 Li Wang , Guannan Wang , Lei Gao , Xinyi Li , Shan Yu , Myungjin Kim , Yueying Wang , Zhiling Gu

Probabilistic forecasting of high dimensional multivariate time series is a notoriously challenging task, both in terms of computational burden and distribution modeling. Most previous work either makes simple distribution assumptions or…

Machine Learning · Computer Science 2021-01-27 Nam Nguyen , Brian Quanz

Motivated by diagnosing the COVID-19 disease using 2D image biomarkers from computed tomography (CT) scans, we propose a novel latent matrix-factor regression model to predict responses that may come from an exponential distribution family,…

Applications · Statistics 2022-10-04 Yuzhe Zhang , Xu Zhang , Hong Zhang , Aiyi Liu , Catherine Liu

Accurate forecasts of the number of newly infected people during an epidemic are critical for making effective timely decisions. This paper addresses this challenge using the SIMLR model, which incorporates machine learning (ML) into the…

Machine Learning · Computer Science 2021-06-04 Roberto Vega , Leonardo Flores , Russell Greiner

As the COVID-19 pandemic continues to ravage the world, it is of critical significance to provide a timely risk prediction of the COVID-19 in multi-level. To implement it and evaluate the public health policies, we develop a framework with…

Physics and Society · Physics 2020-12-02 Lingxiao Wang , Tian Xu , Till Hannes Stoecker , Horst Stoecker , Yin Jiang , Kai Zhou

In this paper, we develop a method to estimate the infection-rate of a disease, over a region, as a field that varies in space and time. To do so, we use time-series of case-counts of symptomatic patients as observed in the areal units that…

Applications · Statistics 2024-06-19 Cosmin Safta , Wyatt Bridgman , Jaideep Ray

Clinical decision support tools built on electronic health records often experience performance drift due to temporal population shifts, particularly when changes in the clinical environment initially affect only a subset of patients,…

Machine Learning · Computer Science 2025-12-16 Mengying Yan , Ziye Tian , Siqi Li , Nan Liu , Benjamin A. Goldstein , Molei Liu , Chuan Hong

In this paper, we use tensor models to analyze Covid-19 pandemic data. First, we use tensor models, canonical polyadic and higher-order Tucker decompositions, to extract patterns over multiple modes. Second, we implement a tensor completion…

Numerical Analysis · Mathematics 2023-01-02 Dipak Dulal , Ramin Goudarzi Karim , Carmeliza Navasca

Mathematical models are widely recognized as an important tool for analyzing and understanding the dynamics of infectious disease outbreaks, predict their future trends, and evaluate public health intervention measures for disease control…

Signal Processing · Electrical Eng. & Systems 2021-06-16 Yukun Tan , Durward Cator , Martial Ndeffo-Mbah , Ulisses Braga-Neto

To model the evolution of diseases with extended latency periods and the presence of asymptomatic patients like COVID-19, we define a simple discrete time stochastic SIR-type epidemic model. We include both latent periods as well as the…

Populations and Evolution · Quantitative Biology 2020-05-14 Xavier Bardina , Marco Ferrante , Carles Rovira

Phenotyping electronic health records (EHR) focuses on defining meaningful patient groups (e.g., heart failure group and diabetes group) and identifying the temporal evolution of patients in those groups. Tensor factorization has been an…

Machine Learning · Computer Science 2019-11-15 Ardavan Afshar , Ioakeim Perros , Haesun Park , Christopher deFilippi , Xiaowei Yan , Walter Stewart , Joyce Ho , Jimeng Sun

The surprisingly mercurial Covid-19 pandemic has highlighted the need to not only accelerate research on infectious disease, but to also study them using novel techniques and perspectives. A major contributor to the difficulty of containing…

Populations and Evolution · Quantitative Biology 2022-07-21 Aminur Rahman , Angela Peace , Ramesh Kesawan , Souparno Ghosh

Spatial-temporal causal time series (STC-TS) involve region-specific temporal observations driven by causally relevant covariates and interconnected across geographic or network-based spaces. Existing methods often model spatial and…

Machine Learning · Computer Science 2025-11-13 Yang Yang , Du Yin , Hao Xue , Flora Salim

Smartphone-based indoor localization has emerged as a cost-effective and accurate solution to localize mobile and IoT devices indoors. However, the challenges of device heterogeneity and temporal variations have hindered its widespread…

Machine Learning · Computer Science 2023-12-19 Danish Gufran , Saideep Tiku , Sudeep Pasricha

We consider a stochastic Susceptible-Exposed-Infected-Recovered (SEIR) epidemiological model. Through the use of a normal form coordinate transform, we are able to analytically derive the stochastic center manifold along with the…

Adaptation and Self-Organizing Systems · Physics 2015-05-13 Eric Forgoston , Lora Billings , Ira B. Schwartz

The evolution of epidemiological parameters, such as instantaneous reproduction number Rt, is important for understanding the transmission dynamics of infectious diseases. Current estimates of time-varying epidemiological parameters often…

Applications · Statistics 2021-10-26 Xian Yang , Shuo Wang , Yuting Xing , Ling Li , Richard Yi Da Xu , Karl J. Friston , Yike Guo

Effective epidemic modeling is essential for managing public health crises, requiring robust methods to predict disease spread and optimize resource allocation. This study introduces a novel deep learning framework that advances time series…

Image and Video Processing · Electrical Eng. & Systems 2026-01-19 Mousa Alizadeh , Mohammad Hossein Samaei , Azam Seilsepour , Alireza Monavarian , Mohammad TH Beheshti
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