Related papers: Classifying bacteria clones using attention-based …
Code clones are pairs of code snippets that implement similar functionality. Clone detection is a fundamental branch of automatic source code comprehension, having many applications in refactoring recommendation, plagiarism detection, and…
The size and the computational load of fine-tuning large-scale pre-trained neural network are becoming two major obstacles in adopting machine learning in many applications. Continual learning (CL) can serve as a remedy through enabling…
A number of studies have suggested using comparisons between DNA sequences of closely related bacterial isolates to estimate the relative rate of recombination to mutation for that bacterial species. We consider such an approach which uses…
Mechanisms of immunity, and of the host-pathogen interactions in general are among the most fundamental problems of medicine, ecology, and evolution studies. Here, we present a microscopic, protein-level, sequence-based model of immune…
Software clone detection identifies similar code snippets. It has been an active research topic that attracts extensive attention over the last two decades. In recent years, machine learning (ML) based detectors, especially deep…
Detecting butterfly hybrids requires knowledge of the parent subspecies, and the process can be tedious when encountering a new subspecies. This study focuses on a specific scenario where a model trained to recognize hybrid species A can…
We present a reproducible deep learning pipeline for leukemic cell classification, focusing on system architecture, experimental robustness, and software design choices for medical image analysis. Acute lymphoblastic leukemia (ALL) is the…
Sepsis is a life-threatening condition which requires rapid diagnosis and treatment. Traditional microbiological methods are time-consuming and expensive. In response to these challenges, deep learning algorithms were developed to identify…
Diagnosing lung inflammation, particularly pneumonia, is of paramount importance for effectively treating and managing the disease. Pneumonia is a common respiratory infection caused by bacteria, viruses, or fungi and can indiscriminately…
Hierarchical classification is a crucial task in many applications, where objects are organized into multiple levels of categories. However, conventional classification approaches often neglect inherent inter-class relationships at…
A new multi-attention based method for solving the MIL problem (MAMIL), which takes into account the neighboring patches or instances of each analyzed patch in a bag, is proposed. In the method, one of the attention modules takes into…
The world is still overwhelmed by the spread of the COVID-19 virus. With over 250 Million infected cases as of November 2021 and affecting 219 countries and territories, the world remains in the pandemic period. Detecting COVID-19 using the…
The complexities inherent to leukemia, multifaceted cancer affecting white blood cells, pose considerable diagnostic and treatment challenges, primarily due to reliance on laborious morphological analyses and expert judgment that are…
Objectives. Sustainable management of plant diseases is an open challenge which has relevant economic and environmental impact. Optimal strategies rely on human expertise for field scouting under favourable conditions to assess the current…
Lung disease poses a substantial global health challenge, with pneumonia being a prevalent concern. This research focuses on leveraging deep learning techniques to detect and assess pneumonia, addressing two interconnected objectives.…
Unlike other histology analysis, classification of tubule status in testis histology is very challenging due to their high similarity of texture and shape. Traditional deep learning networks have difficulties to capture nuance details among…
Fine-grained classification is challenging because categories can only be discriminated by subtle and local differences. Variances in the pose, scale or rotation usually make the problem more difficult. Most fine-grained classification…
The classification of gigapixel histopathology images with deep multiple instance learning models has become a critical task in digital pathology and precision medicine. In this work, we propose a Transformer-based multiple instance…
In this paper, we propose a novel approach for learning multi-label classifiers with the help of privileged information. Specifically, we use similarity constraints to capture the relationship between available information and privileged…
We propose continual instance learning - a method that applies the concept of continual learning to the task of distinguishing instances of the same object category. We specifically focus on the car object, and incrementally learn to…