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The novel coronavirus (COVID-19), a highly infectious respiratory disease caused by the SARS-CoV-2 has emerged as an unprecedented healthcare crisis. The pandemic had a devastating impact on the health, well-being, and economy of the global…

Image and Video Processing · Electrical Eng. & Systems 2024-05-14 Sonit Singh

In this article we propose a compartmental model for the dynamics of Coronavirus Disease 2019 (COVID-19). We take into account the presence of asymptomatic infections and the main policies that have been adopted so far to contain the…

Populations and Evolution · Quantitative Biology 2020-05-18 M. Soledad Aronna , Roberto Guglielmi , Lucas M. Moschen

We study the group test for DNA library screening based on probabilistic approach. Group test is a method of detecting a few positive items from among a large number of items, and has wide range of applications. In DNA library screening,…

Computation · Statistics 2010-04-27 Takafumi Kanamori , Hiroaki Uehara , Masakazu Jimbo

Vaccines are among the most powerful tools used to combat the COVID-19 pandemic. They are highly effective against infection and substantially reduce the risk of severe disease, hospitalization, ICU admission, and death. However, their…

Quantitative Methods · Quantitative Biology 2022-04-07 Marc Wiedermann , Annika H. Rose , Benjamin F. Maier , Jakob J. Kolb , David Hinrichs , Dirk Brockmann

The pandemic linked to COVID-19 infection represents an unprecedented clinical and healthcare challenge for many medical researchers attempting to prevent its worldwide spread. This pandemic also represents a major challenge for…

The prevalence of COVID-19 has been the most serious health challenge of the 21th century to date, concerning national health systems on a daily basis, since December 2019 when it appeared in Wuhan City. Nevertheless, most of the proposed…

Populations and Evolution · Quantitative Biology 2022-11-30 Vasileios E. Papageorgiou , George Tsaklidis

Repeated waves of emerging variants during the SARS-CoV-2 pandemics have highlighted the urge of collecting longitudinal genomic data and developing statistical methods based on time series analyses for detecting new threatening lineages…

Quantitative Methods · Quantitative Biology 2025-01-14 Alexandra Lefebvre , Vincent Maréchal , Arnaud Gloaguen , Obépine Consortium , Amaury Lambert , Yvon Maday

COVID-19 is a virus with high transmission rate that demands rapid identification of the infected patients to reduce the spread of the disease. The current gold-standard test, Reverse-Transcription Polymerase Chain Reaction (RT-PCR), has a…

Effective and reliable screening of patients via Computer-Aided Diagnosis can play a crucial part in the battle against COVID-19. Most of the existing works focus on developing sophisticated methods yielding high detection performance, yet…

Computer Vision and Pattern Recognition · Computer Science 2021-05-11 Krishanu Sarker , Sharbani Pandit , Anupam Sarker , Saeid Belkasim , Shihao Ji

The current COVID-19 pandemic is a serious threat to humanity that directly affects the lungs. Automatic identification of COVID-19 is a challenge for health care officials. The standard gold method for diagnosing COVID-19 is Reverse…

Image and Video Processing · Electrical Eng. & Systems 2022-08-09 Briskline Kiruba S , Petchiammal A , D. Murugan

When the novel coronavirus disease SARS-CoV2 (COVID-19) was officially declared a pandemic by the WHO in March 2020, the scientific community had already braced up in the effort of making sense of the fast-growing wealth of data gathered by…

Populations and Evolution · Quantitative Biology 2020-05-25 Timoteo Carletti , Duccio Fanelli , Francesco Piazza

Major advances in public health have resulted from disease prevention. However, prevention of a new infectious disease by vaccination or pharmaceuticals is made difficult by the slow process of vaccine and drug development. We propose an…

Populations and Evolution · Quantitative Biology 2021-04-15 Jussi Taipale , Ioannis Kontoyiannis , Sten Linnarsson

A new coronavirus disease, called COVID-19, appeared in the Chinese region of Wuhan at the end of last year; since then the virus spread to other countries, including most of Europe. We propose a differential equation governing the…

Populations and Evolution · Quantitative Biology 2020-09-15 Giorgio Sonnino , Pasquale Nardone

Classical epidemiological models assume homogeneous populations. There have been important extensions to model heterogeneous populations, when the identity of the sub-populations is known, such as age group or geographical location. Here,…

Machine Learning · Computer Science 2023-02-10 Roberto Vega , Zehra Shah , Pouria Ramazi , Russell Greiner

This article introduces the sequential Kalman filter, a computationally scalable approach for online changepoint detection with temporally correlated data. The temporal correlation was not considered in the Bayesian online changepoint…

Applications · Statistics 2024-01-02 Hanmo Li , Yuedong Wang , Mengyang Gu

The Coronavirus Disease 2019 (COVID-19) pandemic has impacted many aspects of life globally, and a critical factor in mitigating its effects is screening individuals for infections, thereby allowing for both proper treatment for those…

Image and Video Processing · Electrical Eng. & Systems 2021-08-09 Alexander MacLean , Saad Abbasi , Ashkan Ebadi , Andy Zhao , Maya Pavlova , Hayden Gunraj , Pengcheng Xi , Sonny Kohli , Alexander Wong

Current standard protocols used in the clinic for diagnosing COVID-19 include molecular or antigen tests, generally complemented by a plain chest X-Ray. The combined analysis aims to reduce the significant number of false negatives of these…

Image and Video Processing · Electrical Eng. & Systems 2020-12-01 Julian D. Arias-Londoño , Jorge A. Gomez-Garcia , Laureano Moro-Velazquez , Juan I. Godino-Llorente

We propose a monitoring strategy for efficient and robust estimation of disease prevalence and case numbers within closed and enumerated populations such as schools, workplaces, or retirement communities. The proposed design relies largely…

Methodology · Statistics 2024-04-22 Robert H. Lyles , Yuzi Zhang , Lin Ge , Lance A. Waller

Rerandomization discards assignments with covariates unbalanced in the treatment and control groups to improve estimation and inference efficiency. However, the acceptance-rejection sampling method used in rerandomization is computationally…

Methodology · Statistics 2022-06-28 Ke Zhu , Hanzhong Liu

Identifying subgroups of patients with an enhanced response to a new treatment has become an area of increased interest in the last few years. When there is knowledge about possible subpopulations with an enhanced treatment effect before…

Methodology · Statistics 2018-11-27 Marius Thomas , Björn Bornkamp , Martin Posch , Franz König