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Related papers: Attention-Based Learning on Molecular Ensembles

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Fully-supervised category-level pose estimation aims to determine the 6-DoF poses of unseen instances from known categories, requiring expensive mannual labeling costs. Recently, various self-supervised category-level pose estimation…

Computer Vision and Pattern Recognition · Computer Science 2024-03-20 Jingtao Sun , Yaonan Wang , Mingtao Feng , Chao Ding , Mike Zheng Shou , Ajmal Saeed Mian

In this paper, we address referring expression comprehension: localizing an image region described by a natural language expression. While most recent work treats expressions as a single unit, we propose to decompose them into three modular…

Computer Vision and Pattern Recognition · Computer Science 2018-03-28 Licheng Yu , Zhe Lin , Xiaohui Shen , Jimei Yang , Xin Lu , Mohit Bansal , Tamara L. Berg

Despite the state-of-the-art performance of deep convolutional neural networks, they are susceptible to bias and malfunction in unseen situations. Moreover, the complex computation behind their reasoning is not human-understandable to…

Computer Vision and Pattern Recognition · Computer Science 2023-10-25 Rassa Ghavami Modegh , Ahmad Salimi , Alireza Dizaji , Hamid R. Rabiee

Ultrasound Localization Microscopy can resolve the microvascular bed down to a few micrometers. To achieve such performance microbubble contrast agents must perfuse the entire microvascular network. Microbubbles are then located…

Computer Vision and Pattern Recognition · Computer Science 2023-10-13 Léo Milecki , Jonathan Porée , Hatim Belgharbi , Chloé Bourquin , Rafat Damseh , Patrick Delafontaine-Martel , Frédéric Lesage , Maxime Gasse , Jean Provost

Transformer architectures are now central to sequence modeling tasks. At its heart is the attention mechanism, which enables effective modeling of long-term dependencies in a sequence. Recently, transformers have been successfully applied…

Computer Vision and Pattern Recognition · Computer Science 2022-06-16 Lin Zheng , Huijie Pan , Lingpeng Kong

3D shape analysis is an important research topic in computer vision and graphics. While existing methods have generalized image-based deep learning to meshes using graph-based convolutions, the lack of an effective pooling operation…

Graphics · Computer Science 2019-08-08 Yu-Jie Yuan , Yu-Kun Lai , Jie Yang , Hongbo Fu , Lin Gao

Well-designed molecular representations (fingerprints) are vital to combine medical chemistry and deep learning. Whereas incorporating 3D geometry of molecules (i.e. conformations) in their representations seems beneficial, current 3D…

Machine Learning · Computer Science 2021-05-11 Ziyao Li , Shuwen Yang , Guojie Song , Lingsheng Cai

Predicting molecular conformations (or 3D structures) from molecular graphs is a fundamental problem in many applications. Most existing approaches are usually divided into two steps by first predicting the distances between atoms and then…

Machine Learning · Computer Science 2025-01-07 Minkai Xu , Wujie Wang , Shitong Luo , Chence Shi , Yoshua Bengio , Rafael Gomez-Bombarelli , Jian Tang

Human bodies exhibit various shapes for different identities or poses, but the body shape has certain similarities in structure and thus can be embedded in a low-dimensional space. This paper presents an autoencoder-like network…

Computer Vision and Pattern Recognition · Computer Science 2020-04-20 Boyi Jiang , Juyong Zhang , Jianfei Cai , Jianmin Zheng

Visual perception is critically influenced by the focus of attention. Due to limited resources, it is well known that neural representations are biased in favor of attended locations. Using concurrent eye-tracking and functional Magnetic…

Computer Vision and Pattern Recognition · Computer Science 2020-10-02 Meenakshi Khosla , Gia H. Ngo , Keith Jamison , Amy Kuceyeski , Mert R. Sabuncu

Attention mechanism has been regarded as an advanced technique to capture long-range feature interactions and to boost the representation capability for convolutional neural networks. However, we found two ignored problems in current…

Computer Vision and Pattern Recognition · Computer Science 2021-08-19 Zhu Baozhou , Peter Hofstee , Jinho Lee , Zaid Al-Ars

Pose estimation is a critical task in computer vision with a wide range of applications from activity monitoring to human-robot interaction. However,most of the existing methods are computationally expensive or have complex architecture.…

Computer Vision and Pattern Recognition · Computer Science 2025-04-01 Marsha Mariya Kappan , Eduardo Benitez Sandoval , Erik Meijering , Francisco Cruz

Biological screens are plagued by false positive hits resulting from aggregation. Thus, methods to triage small colloidally aggregating molecules (SCAMs) are in high demand. Herein, we disclose a bespoke machine-learning tool to confidently…

Quantitative Methods · Quantitative Biology 2021-05-04 Kuan Lee , Ann Yang , Yen-Chu Lin , Daniel Reker , Goncalo J. L. Bernardes , Tiago Rodrigues

Large kernel convolutions offer a scalable alternative to vision transformers for high-resolution 3D volumetric analysis, yet naively increasing kernel size often leads to optimization instability. Motivated by the spatial bias inherent in…

Computer Vision and Pattern Recognition · Computer Science 2026-02-02 Ho Hin Lee , Quan Liu , Shunxing Bao , Yuankai Huo , Bennett A. Landman

Video periocular recognition is the task of recognizing an individual's identity based on the region around an individual's eyes. The periocular area is one of the most discriminative regions of the human face, making it suitable for…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Luiz G F Carreira , Breno A Mariano , Victor H C de Melo , David Menotti , William Robson Schwartz

Self-supervised learning methods based on image patch reconstruction have witnessed great success in training auto-encoders, whose pre-trained weights can be transferred to fine-tune other downstream tasks of image understanding. However,…

Computer Vision and Pattern Recognition · Computer Science 2022-09-20 Junjia Huang , Haofeng Li , Guanbin Li , Xiang Wan

Accurately predicting molecular properties is a challenging but essential task in drug discovery. Recently, many mono-modal deep learning methods have been successfully applied to molecular property prediction. However, the inherent…

Machine Learning · Computer Science 2024-09-16 Xiaohua Lu , Liangxu Xie , Lei Xu , Rongzhi Mao , Shan Chang , Xiaojun Xu

Establishment of point correspondence between camera and object coordinate systems is a promising way to solve 6D object poses. However, surrogate objectives of correspondence learning in 3D space are a step away from the true ones of…

Computer Vision and Pattern Recognition · Computer Science 2022-10-13 Hongyang Li , Jiehong Lin , Kui Jia

Molecular representation learning (MRL) is a key step to build the connection between machine learning and chemical science. In particular, it encodes molecules as numerical vectors preserving the molecular structures and features, on top…

Quantitative Methods · Quantitative Biology 2023-11-30 Zhichun Guo , Kehan Guo , Bozhao Nan , Yijun Tian , Roshni G. Iyer , Yihong Ma , Olaf Wiest , Xiangliang Zhang , Wei Wang , Chuxu Zhang , Nitesh V. Chawla

There have been recent efforts to learn more meaningful representations via fixed length codewords from mesh data, since a mesh serves as a complete model of underlying 3D shape compared to a point cloud. However, the mesh connectivity…

Computer Vision and Pattern Recognition · Computer Science 2023-08-30 Eric Lei , Muhammad Asad Lodhi , Jiahao Pang , Junghyun Ahn , Dong Tian