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We revisit the classic combinatorial pattern matching problem of finding a longest common subsequence (LCS). For strings $x$ and $y$ of length $n$, a textbook algorithm solves LCS in time $O(n^2)$, but although much effort has been spent,…

Computational Complexity · Computer Science 2018-03-05 Karl Bringmann , Marvin Künnemann

The algorithmic tasks of computing the Hamming distance between a given pattern of length $m$ and each location in a text of length $n$ is one of the most fundamental algorithmic tasks in string algorithms. Unfortunately, there is evidence…

Data Structures and Algorithms · Computer Science 2015-12-15 Tsvi Kopelowitz , Ely Porat

We consider the problem of finding a minimum cut of a weighted graph presented as a single-pass stream. While graph sparsification in streams has been intensively studied, the specific application of finding minimum cuts in streams is less…

Data Structures and Algorithms · Computer Science 2024-12-09 Matthew Ding , Alexandro Garces , Jason Li , Honghao Lin , Jelani Nelson , Vihan Shah , David P. Woodruff

We give a proof of the conjecture of Nelson and Nguyen [FOCS 2013] on the optimal dimension and sparsity of oblivious subspace embeddings, up to sub-polylogarithmic factors: For any $n\geq d$ and $\epsilon\geq d^{-O(1)}$, there is a random…

Data Structures and Algorithms · Computer Science 2025-11-18 Shabarish Chenakkod , Michał Dereziński , Xiaoyu Dong

We consider the problem of maintaining a maximal independent set (MIS) in a dynamic graph subject to edge insertions and deletions. Recently, Assadi, Onak, Schieber and Solomon (STOC 2018) showed that an MIS can be maintained in sublinear…

Data Structures and Algorithms · Computer Science 2018-08-31 Krzysztof Onak , Baruch Schieber , Shay Solomon , Nicole Wein

In this paper we present a new algorithm for solving linear programs that requires only $\tilde{O}(\sqrt{rank(A)}L)$ iterations to solve a linear program with $m$ constraints, $n$ variables, and constraint matrix $A$, and bit complexity…

Data Structures and Algorithms · Computer Science 2015-03-06 Yin Tat Lee , Aaron Sidford

In this paper, we revisit the much studied LCS problem for two given sequences. Based on the algorithm of Iliopoulos and Rahman for solving the LCS problem, we have suggested 3 new improved algorithms. We first reformulate the problem in a…

Data Structures and Algorithms · Computer Science 2015-08-25 Daxin Zhu , Lei Wang , Yingjie Wu , Xiaodong Wang

We present an algorithm that on input of an $n$-vertex $m$-edge weighted graph $G$ and a value $k$, produces an {\em incremental sparsifier} $\hat{G}$ with $n-1 + m/k$ edges, such that the condition number of $G$ with $\hat{G}$ is bounded…

Data Structures and Algorithms · Computer Science 2015-03-13 Ioannis Koutis , Gary L. Miller , Richard Peng

Longest common subsequence ($\mathsf{LCS}$) is a classic and central problem in combinatorial optimization. While $\mathsf{LCS}$ admits a quadratic time solution, recent evidence suggests that solving the problem may be impossible in truly…

Data Structures and Algorithms · Computer Science 2021-11-23 Aviad Rubinstein , Saeed Seddighin , Zhao Song , Xiaorui Sun

We study algorithms for spectral graph sparsification. The input is a graph $G$ with $n$ vertices and $m$ edges, and the output is a sparse graph $\tilde{G}$ that approximates $G$ in an algebraic sense. Concretely, for all vectors $x$ and…

Data Structures and Algorithms · Computer Science 2013-11-19 Ioannis Koutis , Alex Levin , Richard Peng

In this paper, we consider a generalized longest common subsequence problem with multiple substring inclusive constraints. For the two input sequences $X$ and $Y$ of lengths $n$ and $m$, and a set of $d$ constraints $P=\{P_1,\cdots,P_d\}$…

Data Structures and Algorithms · Computer Science 2015-05-26 Daxin Zhu , Lei Wang , Yingjie Wu , Xiaodong Wang

In this paper, we construct a data structure to efficiently compute the longest increasing subsequence of a sequence subject to dynamic updates. Our data structure supports a query for the longest increasing subsequence in $O(r+\log n)$…

Data Structures and Algorithms · Computer Science 2013-12-17 Alex Chen , Timothy Chu , Nathan Pinsker

Expander graphs are known to be robust to edge deletions in the following sense: for any online sequence of edge deletions $e_1, e_2, \ldots, e_k$ to an $m$-edge graph $G$ that is initially a $\phi$-expander, the algorithm can grow a set $P…

Data Structures and Algorithms · Computer Science 2025-04-02 Simon Meierhans , Maximilian Probst Gutenberg , Thatchaphol Saranurak

In the classic longest common substring (LCS) problem, we are given two strings $S$ and $T$, each of length at most $n$, over an alphabet of size $\sigma$, and we are asked to find a longest string occurring as a fragment of both $S$ and…

Data Structures and Algorithms · Computer Science 2025-11-18 Panagiotis Charalampopoulos , Tomasz Kociumaka , Jakub Radoszewski , Solon P. Pissis

In this paper, we introduce a variant of spectral sparsification, called probabilistic $(\varepsilon,\delta)$-spectral sparsification. Roughly speaking, it preserves the cut value of any cut $(S,S^{c})$ with an $1\pm\varepsilon$…

Data Structures and Algorithms · Computer Science 2014-01-03 Yin Tat Lee

The textbook algorithm for real-weighted single-source shortest paths takes $O(mn)$ time on a graph with $m$ edges and $n$ vertices. A recent breakthrough algorithm by [Fin24] takes $\tilde{O}(mn^{8/9})$ randomized time. The running time…

Data Structures and Algorithms · Computer Science 2025-12-01 Kent Quanrud , Navid Tajkhorshid

We present two algorithms for dynamically maintaining a spanning forest of a graph undergoing edge insertions and deletions. Our algorithms guarantee {\em worst-case update time} and work against an adaptive adversary, meaning that an edge…

Data Structures and Algorithms · Computer Science 2017-04-19 Danupon Nanongkai , Thatchaphol Saranurak

We develop simple and general techniques to obtain faster (near-linear time) static approximation algorithms, as well as efficient dynamic data structures, for four fundamental geometric optimization problems: minimum piercing set (MPS),…

Computational Geometry · Computer Science 2024-07-31 Sujoy Bhore , Timothy M. Chan

We present a $O(1)$-approximate fully dynamic algorithm for the $k$-median and $k$-means problems on metric spaces with amortized update time $\tilde O(k)$ and worst-case query time $\tilde O(k^2)$. We complement our theoretical analysis…

Data Structures and Algorithms · Computer Science 2023-10-27 Sayan Bhattacharya , Martín Costa , Silvio Lattanzi , Nikos Parotsidis

We study the Maximum Independent Set of Rectangles (MISR) problem: given a set of $n$ axis-parallel rectangles, find a largest-cardinality subset of the rectangles, such that no two of them overlap. MISR is a basic geometric optimization…

Data Structures and Algorithms · Computer Science 2016-08-02 Julia Chuzhoy , Alina Ene