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Longest common subsequence (LCS) is one of the most fundamental problems in combinatorial optimization. Apart from theoretical importance, LCS has enormous applications in bioinformatics, revision control systems, and data comparison…

Data Structures and Algorithms · Computer Science 2020-03-17 MohammadTaghi Hajiaghayi , Masoud Seddighin , Saeed Seddighin , Xiaorui Sun

We give a fully dynamic algorithm maintaining a $(1-\varepsilon)$-approximate directed densest subgraph in $\tilde{O}(\log^3(n)/\varepsilon^6)$ amortized time or $\tilde{O}(\log^4(n)/\varepsilon^7)$ worst-case time per edge update (where…

Data Structures and Algorithms · Computer Science 2023-12-19 Richard Li , Kent Quanrud

The notions of synchronizing and partitioning sets are recently introduced variants of locally consistent parsings with great potential in problem-solving. In this paper we propose a deterministic algorithm that constructs for a given…

Data Structures and Algorithms · Computer Science 2024-04-23 Dmitry Kosolobov , Nikita Sivukhin

We study vertex cut and flow sparsifiers that were recently introduced by Moitra, and Leighton and Moitra. We improve and generalize their results. We give a new polynomial-time algorithm for constructing O(log k / log log k) cut and flow…

Data Structures and Algorithms · Computer Science 2010-12-10 Konstantin Makarychev , Yury Makarychev

The text-to-pattern Hamming distances problem asks to compute the Hamming distances between a given pattern of length $m$ and all length-$m$ substrings of a given text of length $n\ge m$. We focus on the $k$-mismatch version of the problem,…

Data Structures and Algorithms · Computer Science 2022-03-30 Raphaël Clifford , Paweł Gawrychowski , Tomasz Kociumaka , Daniel P. Martin , Przemysław Uznański

We revisit two well-known algorithmic problems on strings: computing a shortest unique substring (SUS) and a shortest absent substring (SAS) of a string $S$ of length $n$. Both problems admit folklore $\mathcal{O}(n)$-time solutions using…

Data Structures and Algorithms · Computer Science 2026-05-07 Panagiotis Charalampopoulos , Manal Mohamed , Solon P. Pissis , Hilde Verbeek , Wiktor Zuba

We present fully dynamic approximation algorithms for the Maximum Independent Set problem on several types of geometric objects: intervals on the real line, arbitrary axis-aligned squares in the plane and axis-aligned $d$-dimensional…

Data Structures and Algorithms · Computer Science 2020-07-20 Sujoy Bhore , Jean Cardinal , John Iacono , Grigorios Koumoutsos

Given a multiset $S$ of $n$ positive integers and a target integer $t$, the subset sum problem is to decide if there is a subset of $S$ that sums up to $t$. We present a new divide-and-conquer algorithm that computes all the realizable…

Data Structures and Algorithms · Computer Science 2016-12-13 Konstantinos Koiliaris , Chao Xu

The dynamic set cover problem has been subject to growing research attention in recent years. In this problem, we are given as input a dynamic universe of at most $n$ elements and a fixed collection of $m$ sets, where each element appears…

Data Structures and Algorithms · Computer Science 2024-07-10 Shay Solomon , Amitai Uzrad , Tianyi Zhang

We show a fully dynamic algorithm for maintaining $(1+\epsilon)$-approximate \emph{size} of maximum matching of the graph with $n$ vertices and $m$ edges using $m^{0.5-\Omega_{\epsilon}(1)}$ update time. This is the first polynomial…

Data Structures and Algorithms · Computer Science 2024-04-30 Sayan Bhattacharya , Peter Kiss , Thatchaphol Saranurak

The Polyline Bundle Simplification (PBS) problem is a generalization of the classical polyline simplification problem. Given a set of polylines, which may share line segments and points, PBS asks for the smallest consistent simplification…

Computational Geometry · Computer Science 2021-08-25 Yannick Bosch , Peter Schäfer , Joachim Spoerhase , Sabine Storandt , Johannes Zink

Spanning trees of low average stretch on the non-tree edges, as introduced by Alon et al. [SICOMP 1995], are a natural graph-theoretic object. In recent years, they have found significant applications in solvers for symmetric diagonally…

Data Structures and Algorithms · Computer Science 2019-08-01 Sebastian Forster , Gramoz Goranci

Lipschitz continuity of algorithms, introduced by Kumabe and Yoshida (FOCS'23), measures the stability of an algorithm against small input perturbations. Algorithms with small Lipschitz continuity are desirable, as they ensure reliable…

Data Structures and Algorithms · Computer Science 2025-07-01 Tatsuya Gima , Soh Kumabe , Yuichi Yoshida

A noticeable fraction of Algorithms papers in the last few decades improve the running time of well-known algorithms for fundamental problems by logarithmic factors. For example, the $O(n^2)$ dynamic programming solution to the Longest…

Computational Complexity · Computer Science 2018-05-01 Amir Abboud , Karl Bringmann

For many algorithmic problems on graphs of treewidth $t$, a standard dynamic programming approach gives an algorithm with time and space complexity $2^{\mathcal{O}(t)}\cdot n^{\mathcal{O}(1)}$. It turns out that when one considers the more…

Data Structures and Algorithms · Computer Science 2020-07-13 Jesper Nederlof , Michał Pilipczuk , Céline M. F. Swennenhuis , Karol Węgrzycki

In this paper we show how to recover a spectral approximations to broad classes of structured matrices using only a polylogarithmic number of adaptive linear measurements to either the matrix or its inverse. Leveraging this result we obtain…

Data Structures and Algorithms · Computer Science 2018-12-18 Arun Jambulapati , Kirankumar Shiragur , Aaron Sidford

The subgradient method is one of the most fundamental algorithmic schemes for nonsmooth optimization. The existing complexity and convergence results for this method are mainly derived for Lipschitz continuous objective functions. In this…

Optimization and Control · Mathematics 2024-11-01 Xiao Li , Lei Zhao , Daoli Zhu , Anthony Man-Cho So

Consider the following distance query for an $n$-node graph $G$ undergoing edge insertions and deletions: given two sets of nodes $I$ and $J$, return the distances between every pair of nodes in $I\times J$. This query is rather general and…

Data Structures and Algorithms · Computer Science 2019-10-18 Jan van den Brand , Danupon Nanongkai

We consider the problems of maintaining an approximate maximum matching and an approximate minimum vertex cover in a dynamic graph undergoing a sequence of edge insertions/deletions. Starting with the seminal work of Onak and Rubinfeld…

Data Structures and Algorithms · Computer Science 2016-11-21 Sayan Bhattacharya , Deeparnab Chakrabarty , Monika Henzinger

Spike sorting is a class of algorithms used in neuroscience to attribute the time occurences of particular electric signals, called action potential or spike, to neurons. We rephrase this problem as a particular optimization problem : Lasso…

Statistics Theory · Mathematics 2022-04-12 Laurent Dragoni , Rémi Flamary , Karim Lounici , Patricia Reynaud-Bouret
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