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In this work, we report a new method to simulate active Brownian particles (ABPs) in molecular dynamics (MD) simulations. Immersed in a fluid, each ABP consists of a head particle and a spherical phantom region of fluid where the flagellum…

Soft Condensed Matter · Physics 2019-02-15 Liya Wang , Xinpeng Xu , Zhigang Li , Tiezheng Qian

Active matter deals with systems whose particles consume energy at the individual level in order to move. To unravel features such as the emergence of collective structures several models have been suggested, such as the on-lattice model of…

We study the transport of self-propelled noninteracting active Brownian particles (ABPs) and run-and-tumble particles (RTPs) in long tubes of varying widths. Using a moment expansion, we construct a generalized Fick-Jacobs framework for the…

Soft Condensed Matter · Physics 2026-04-16 Yongfeng Zhao

Non-Markovian systems form a broad area of physics that remains greatly unexplored despite years of intensive investigations. The spotlight is on memory as a source of effects that are absent in their Markovian counterparts. In this work we…

Statistical Mechanics · Physics 2024-05-29 M. Wiśniewski , J. Spiechowicz

Active Brownian particles (ABPs) represent a minimal model of active matter consisting of self-propelled spheres with purely repulsive interactions and rotational noise. Here, we examine the pressure of ABPs in two dimensions in both closed…

Soft Condensed Matter · Physics 2017-01-11 Adam Patch , David Yllanes , M. Cristina Marchetti

Active systems, or active matter, are self-driven systems which live, or function, far from equilibrium - a paradigmatic example which we focus on here is provided by a suspension of self-motile particles. Active systems are far from…

Soft Condensed Matter · Physics 2015-05-19 Giuseppe Gonnella , Davide Marenduzzo , Antonio Suma , Adriano Tiribocchi

The multivariate Ornstein-Uhlenbeck process is used in many branches of science and engineering to describe the regression of a system to its stationary mean. Here we present an $O(N)$ Bayesian method to estimate the drift and diffusion…

Statistical Mechanics · Physics 2018-08-01 Rajesh Singh , Dipanjan Ghosh , R. Adhikari

An Ornstein-Uhlenbeck (OU) process can be considered as a continuous time interpolation of the discrete time AR$(1)$ process. Departing from this fact, we analyse in this work the effect of iterating OU treated as a linear operator that…

Statistics Theory · Mathematics 2012-10-02 Argimiro Arratia , Alejandra Cabaña , Enrique M. Cabaña

Irreversibility is one of the most intriguing concepts in physics. While microscopic physical laws are perfectly reversible, macroscopic average behavior has a preferred direction of time. According to the second law of thermodynamics, this…

Quantum Physics · Physics 2017-04-12 T. B. Batalhao , A. M. Souza , R. S. Sarthour , I. S. Oliveira , M. Paternostro , E. Lutz , R. M. Serra

The active Brownian particle (ABP) model describes a swimmer, synthetic or living, whose direction of swimming is a Brownian motion. The swimming is due to a propulsion force, and the fluctuations are typically thermal in origin. We present…

Soft Condensed Matter · Physics 2022-07-18 Jean-Luc Thiffeault , Jiajia Guo

We study the stationary fluctuations of independent run-and-tumble particles. We prove that the joint densities of particles with given internal state converges to an infinite dimensional Ornstein-Uhlenbeck process. We also consider an…

Probability · Mathematics 2024-03-13 Frank Redig , Hidde van Wiechen

Due to its inherent intertwinement with irreversibility, entropy production is a prime observable to monitor in systems of active particles. In this numerical study, entropy production in the liquid, hexatic and solid phases of a…

Soft Condensed Matter · Physics 2024-12-11 Massimiliano Semeraro , Giuseppe Negro , Antonio Suma , Federico Corberi , Giuseppe Gonnella

Active matter is a term encompassing particle-based assemblies with some form of self-propulsion, including certain biological systems as well as synthetic systems such as artificial colloidal swimmers, all of which can exhibit a remarkable…

Soft Condensed Matter · Physics 2024-04-23 C. Reichhardt , A. Libal , C. J. O. Reichhardt

The so-called "supOU" processes, namely the superpositions of Ornstein-Uhlenbeck type processes are stationary processes for which one can specify separately the marginal distribution and the dependence structure. They can have finite or…

Probability · Mathematics 2019-08-22 Danijel Grahovac , Nikolai N. Leonenko , Murad S. Taqqu

We study motion of tagged particles in a harmonic chain of active particles. We consider three models of active particle dynamics - run and tumble particle, active Ornstein-Uhlenbeck particle and active Brownian particle. We investigate the…

Statistical Mechanics · Physics 2022-02-14 Prashant Singh , Anupam Kundu

Taking an open quantum systems approach, we derive a collective equation of motion for the dynamics of a matter-wave bright soliton moving through a thermal cloud of a distinct atomic species. The reservoir interaction involves energy…

Quantum Gases · Physics 2016-06-08 R. G. McDonald , A. S. Bradley

We consider a model of active Brownian particles with velocity-alignment in two spatial dimensions with passive and active fluctuations. Hereby, active fluctuations refers to purely non-equilibrium stochastic forces correlated with the…

Statistical Mechanics · Physics 2016-05-02 Robert Grossmann , Lutz Schimansky-Geier , Pawel Romanczuk

We derive a Doi-Peliti field theory for free active Ornstein-Uhlenbeck particles, or, equivalently, free inertial Brownian particles, and present a way to diagonalise the Gaussian part of the action and calculate the propagator. Unlike…

Statistical Mechanics · Physics 2021-06-09 Marius Bothe , Gunnar Pruessner

Unlike equilibrium systems, active matter is not governed by the conventional laws of thermodynamics. Through a series of analytic calculations and Langevin dynamics simulations, we explore how systems cross over from equilibrium to active…

Soft Condensed Matter · Physics 2018-03-28 Ayhan Duzgun , Jonathan V. Selinger

Stochastic motion of particles in a highly unstable potential generates a number of diverging trajectories leading to undefined statistical moments of the particle position. This makes experiments challenging and breaks down a standard…