Related papers: Approximating the Median under the Ulam Metric
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We initiate the study of metric embeddings with \emph{outliers}. Given some metric space $(X,\rho)$ we wish to find a small set of outlier points $K \subset X$ and either an isometric or a low-distortion embedding of $(X\setminus K,\rho)$…
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Constrained clustering problems generalize classical clustering formulations, e.g., $k$-median, $k$-means, by imposing additional constraints on the feasibility of clustering. There has been significant recent progress in obtaining…
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Clustering is a classic topic in optimization with $k$-means being one of the most fundamental such problems. In the absence of any restrictions on the input, the best known algorithm for $k$-means with a provable guarantee is a simple…
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String consensus problems aim at finding a string that minimizes some given distance with respect to an input set of strings. In particular, in the Closest string problem, we are given a set of strings of equal length and a radius $d$. The…
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Aligning a sequence to a walk in a labeled graph is a problem of fundamental importance to Computational Biology. For finding a walk in an arbitrary graph with $|E|$ edges that exactly matches a pattern of length $m$, a lower bound based on…
In the classical NP-hard metric $k$-median problem, we are given a set of $n$ clients and centers with metric distances between them, along with an integer parameter $k\geq 1$. The objective is to select a subset of $k$ open centers that…
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We consider a generalization of $k$-median and $k$-center, called the {\em ordered $k$-median} problem. In this problem, we are given a metric space $(\mathcal{D},\{c_{ij}\})$ with $n=|\mathcal{D}|$ points, and a non-increasing weight…