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Bayesian methods have been very successful in quantifying uncertainty in physics-based problems in parameter estimation and prediction. In these cases, physical measurements y are modeled as the best fit of a physics-based model…

Data Analysis, Statistics and Probability · Physics 2015-02-06 Dave Higdon , Jordan D. McDonnell , Nicolas Schunck , Jason Sarich , Stefan M. Wild

Mapping people dynamics is a crucial skill for robots, because it enables them to coexist in human-inhabited environments. However, learning a model of people dynamics is a time consuming process which requires observation of large amount…

Robotics · Computer Science 2025-01-09 Francesco Verdoja , Tomasz Piotr Kucner , Ville Kyrki

Joint modeling of spatially-oriented dependent variables is commonplace in the environmental sciences, where scientists seek to estimate the relationships among a set of environmental outcomes accounting for dependence among these outcomes…

Methodology · Statistics 2021-03-22 Lu Zhang , Sudipto Banerjee , Andrew O. Finley

Growing anthropogenic pressures have increased the need for robust predictive models. Meeting this demand requires approaches that can handle bigger data to yield forecasts that capture the variability and underlying uncertainty of…

Quantitative Methods · Quantitative Biology 2024-08-06 EM Wolkovich , T Jonathan Davies , William D Pearse , Michael Betancourt

Phylogenetics is now fundamental in life sciences, providing insights into the earliest branches of life and the origins and spread of epidemics. However, finding suitable phylogenies from the vast space of possible trees remains…

Populations and Evolution · Quantitative Biology 2024-01-24 Matthew J Penn , Neil Scheidwasser , Joseph Penn , Christl A Donnelly , David A Duchêne , Samir Bhatt

Effectively modeling non-stationary dynamics in probabilistic multivariate time series(MTS) forecasting requires balancing expressiveness with robustness. Existing parametric approaches benefit from strong inductive biases but lack…

Machine Learning · Computer Science 2026-05-25 Jinglin Li , Jun Tan , QI Fang , Ning Gui

This paper demonstrates the advantages of sharing information about unknown features of covariates across multiple model components in various nonparametric regression problems including multivariate, heteroscedastic, and semi-continuous…

Methodology · Statistics 2019-06-11 Antonio R. Linero , Debajyoti Sinha , Stuart R. Lipsitz

Customer behavior is often assumed to follow weak rationality, which implies that adding a product to an assortment will not increase the choice probability of another product in that assortment. However, an increasing amount of research…

Machine Learning · Computer Science 2021-10-14 Yi-Chun Chen , Velibor V. Mišić

Tree structured graphical models are powerful at expressing long range or hierarchical dependency among many variables, and have been widely applied in different areas of computer science and statistics. However, existing methods for…

Machine Learning · Statistics 2014-01-17 Le Song , Han Liu , Ankur Parikh , Eric Xing

We introduce a probabilistic (Bayesian) framework and associated software toolbox for mapping population receptive fields (pRFs) based on fMRI data. This generic approach is intended to work with stimuli of any dimension and is demonstrated…

Neurons and Cognition · Quantitative Biology 2018-05-21 Peter Zeidman , Edward Harry Silson , Dietrich Samuel Schwarzkopf , Chris Ian Baker , Will Penny

Robust tracking of a target in a clutter environment is an important and challenging task. In recent years, the nearest neighbor methods and probabilistic data association filters were proposed. However, the performance of these methods…

Machine Learning · Computer Science 2020-12-18 Bahman Moraffah , Christ Richmond , Raha Moraffah , Antonia Papandreou-Suppappola

We present a method for incorporating missing data in non-parametric statistical learning without the need for imputation. We focus on a tree-based method, Bayesian Additive Regression Trees (BART), enhanced with "Missingness Incorporated…

Machine Learning · Statistics 2014-02-14 Adam Kapelner , Justin Bleich

To address the interlinked biodiversity and climate crises, we need an understanding of where species occur and how these patterns are changing. However, observational data on most species remains very limited, and the amount of data…

Machine Learning · Computer Science 2024-03-29 Hager Radi Abdelwahed , Mélisande Teng , David Rolnick

We study a simple model of a forager as a walk that modifies a relaxing substrate. Within it simplicity, this provides an insight on a number of relevant and non-intuitive facts. Even without memory of the good places to feed and no…

Adaptation and Self-Organizing Systems · Physics 2015-06-18 Guillermo Abramson , Marcelo N Kuperman , Juan M Morales , Joel C Miller

We consider the challenges that arise when fitting complex ecological models to 'large' data sets. In particular, we focus on random effect models which are commonly used to describe individual heterogeneity, often present in ecological…

Methodology · Statistics 2022-05-17 Ruth King , Blanca Sarzo , Víctor Elvira

The rise of trait-based ecology has led to an increased focus on the distribution and dynamics of traits in communities. However, a general theory of trait-based ecology, that can apply across different scales (e.g., species that differ in…

Populations and Evolution · Quantitative Biology 2015-02-25 Brian J. Enquist , Jon Norberg , Stephen P. Bonser , Cyrille Violle , Colleen T. Webb , Amanda Henderson , Lindsey L. Sloat , Van M. Savage

Integrated population models (IPMs) are a promising approach to test ecological theories and assess wildlife populations in dynamic and uncertain conditions. By combining multiple data sources into a unified model, they enable the…

Populations and Evolution · Quantitative Biology 2025-06-30 Murat Ersalman , Mervi Kunnasranta , Markus Ahola , Anja M. Carlsson , Sara Persson , Britt-Marie Bäcklin , Inari Helle , Linnea Cervin , Jarno Vanhatalo

We provide a microeconomic framework for decision trees: a popular machine learning method. Specifically, we show how decision trees represent a non-compensatory decision protocol known as disjunctions-of-conjunctions and how this protocol…

Applications · Statistics 2017-11-15 Timothy Brathwaite , Akshay Vij , Joan L. Walker

In the face of uncertain biological response to climate change and the many critiques concerning model complexity it is increasingly important to develop predictive mechanistic frameworks that capture the dominant features of ecological…

Populations and Evolution · Quantitative Biology 2015-06-05 Christopher P. Kempes , Sungho Choi , William Dooris , Geoffrey B. West

Here we introduce a general class of multiple calibration birth-death tree priors for use in Bayesian phylogenetic inference. All tree priors in this class separate ancestral node heights into a set of "calibrated nodes" and "uncalibrated…

Populations and Evolution · Quantitative Biology 2013-11-21 Joseph Heled , Alexei J. Drummond