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One year after the onset of the COVID-19 pandemic, the origin of SARS-CoV-2 still eludes humanity. Early publications firmly stated that the virus was of natural origin, and the possibility that the virus might have escaped from a lab was…

This paper presents a project, named VIDAR-19, able to extract automatically diseases from the CORD-19 dataset, and also diseases which might be considered as risk factors. The project relies on the ICD-11 classification of diseases…

Information Retrieval · Computer Science 2020-05-05 Francis Wolinski

We created this CORD-NER dataset with comprehensive named entity recognition (NER) on the COVID-19 Open Research Dataset Challenge (CORD-19) corpus (2020-03-13). This CORD-NER dataset covers 75 fine-grained entity types: In addition to the…

Computation and Language · Computer Science 2020-04-17 Xuan Wang , Xiangchen Song , Bangzheng Li , Yingjun Guan , Jiawei Han

In light of the continuing emergence of new SARS-CoV-2 variants and vaccines, we create a simulation framework for exploring possible infection trajectories under various scenarios. The situations of primary interest involve the interaction…

Populations and Evolution · Quantitative Biology 2022-01-10 Kory D. Johnson , Annemarie Grass , Daniel Toneian , Mathias Beiglböck , Jitka Polechová

Diachronic text mining has frequently been applied to long-term linguistic surveys of word meaning and usage shifts over time. In this paper we apply short-term diachronic text mining to a rapidly growing corpus of scientific publications…

Computation and Language · Computer Science 2021-10-28 James Powell , Kari Sentz

The outbreak of the COVID-19 leads to a burst of information in major online social networks (OSNs). Facing this constantly changing situation, OSNs have become an essential platform for people expressing opinions and seeking…

Social and Information Networks · Computer Science 2020-12-03 Ninghan Chen , Zhiqiang Zhong , Jun Pang

The COVID-19 pandemic has sparked unprecedented mobilization of scientists, generating a deluge of papers that makes it hard for researchers to keep track and explore new directions. Search engines are designed for targeted queries, not for…

Information Retrieval · Computer Science 2020-09-22 Tom Hope , Jason Portenoy , Kishore Vasan , Jonathan Borchardt , Eric Horvitz , Daniel S. Weld , Marti A. Hearst , Jevin West

Currently, the world seeks to find appropriate mitigation techniques to control and prevent the spread of the new SARS-CoV-2. In our paper herein, we present a peculiar Multi-Task Learning framework that jointly predicts the effect of…

Machine Learning · Computer Science 2021-08-24 Bonaventure Chidube Molokwu , Shaon Bhatta Shuvo , Ziad Kobti , Anne Snowdon

At the time of writing, the world population is suffering from more than 10,000 registered COVID-19 disease epidemic induced deaths since the outbreak of the Corona virus more than three months ago now officially known as SARS-CoV-2. Since,…

Sound · Computer Science 2020-03-26 Björn W. Schuller , Dagmar M. Schuller , Kun Qian , Juan Liu , Huaiyuan Zheng , Xiao Li

Future SARS-CoV-2 virus outbreak COVID-XX might possibly occur during the next years. However the pathology in humans is so recent that many clinical aspects, like early detection of complications, side effects after recovery or early…

Image and Video Processing · Electrical Eng. & Systems 2020-05-29 D. Gil , K. Díaz-Chito , C. Sánchez , A. Hernández-Sabaté

In the present article we introduce an epidemiological model for the investigation of the spread of epidemics caused by viruses. The model is applied specifically to COVID-19, the disease caused by the SARS-Cov-2 virus (aka "novel…

Populations and Evolution · Quantitative Biology 2020-04-10 Rodrigo A. Schulz , Carlos H. Coimbra-Araújo , Samuel W. S. Costiche

The importance of the working document is that it allows the analysis of the information and the status of cases associated with (SARS-CoV-2) COVID-19 as open data at the municipal, state and national level, with a daily record of patients,…

Computers and Society · Computer Science 2020-10-30 Carlos Medel-Ramirez , Hilario Medel-Lopez

The COVID-19 epidemic is considered as the global health crisis of the whole society and the greatest challenge mankind faced since World War Two. Unfortunately, the fake news about COVID-19 is spreading as fast as the virus itself. The…

Social and Information Networks · Computer Science 2020-11-24 Yichuan Li , Bohan Jiang , Kai Shu , Huan Liu

Following the global COVID-19 pandemic, the number of scientific papers studying the virus has grown massively, leading to increased interest in automated literate review. We present a clinical text mining system that improves on previous…

Computation and Language · Computer Science 2020-12-09 Veysel Kocaman , David Talby

In December 2019, a novel virus called COVID-19 had caused an enormous number of causalities to date. The battle with the novel Coronavirus is baffling and horrifying after the Spanish Flu 2019. While the front-line doctors and medical…

Machine Learning · Computer Science 2023-03-30 MD Abdullah Al Nasim , Aditi Dhali , Faria Afrin , Noshin Tasnim Zaman , Nazmul Karimm , Md Mahim Anjum Haque

A comprehensive bibliographic review with R statistical methods of the COVID pandemic in PubMed literature and Web of Science Core Collection, supported with Google Scholar search. In addition, a case study review of emerging new approaches…

The scientific papers dealing with the novel betacoronavirus SARS-CoV-2 and the coronavirus disease 2019 (COVID-19) caused by this virus, published in 2020 and recorded in the database PUBMED, were retrieved on April 27, 2020. About 20\% of…

Digital Libraries · Computer Science 2020-05-14 Johannes Stegmann

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has a variable clinical presentation that ranges from asymptomatic, to severe disease with cytokine storm. The mortality rates also differ across the globe, ranging from 0.5-13%.…

COVID-19 has been devastating the world since the end of 2019 and has continued to play a significant role in major national and worldwide events, and consequently, the news. In its wake, it has left no life unaffected. Having earned the…

Social and Information Networks · Computer Science 2021-04-23 Shayan Fazeli , Davina Zamanzadeh , Anaelia Ovalle , Thu Nguyen , Gilbert Gee , Majid Sarrafzadeh

Over the past few months, the outbreak of Coronavirus disease (COVID-19) has been expanding over the world. A reliable and accurate dataset of the cases is vital for scientists to conduct related research and for policy-makers to make…

Applications · Statistics 2020-12-01 Guannan Wang , Zhiling Gu , Xinyi Li , Shan Yu , Myungjin Kim , Yueying Wang , Lei Gao , Li Wang
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