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Drug combinations are frequently used for the treatment of cancer patients in order to increase efficacy, decrease adverse side effects, or overcome drug resistance. Given the enormous number of drug combinations, it is cost- and…

Molecular Networks · Quantitative Biology 2021-02-18 Peiran Jiang , Shujun Huang , Zhenyuan Fu , Zexuan Sun , Ted M. Lakowski , Pingzhao Hu

Graph-based Cognitive Diagnosis (CD) has attracted much research interest due to its strong ability on inferring students' proficiency levels on knowledge concepts. While graph-based CD models have demonstrated remarkable performance, we…

Computers and Society · Computer Science 2025-01-23 Pengyang Shao , Yonghui Yang , Chen Gao , Lei Chen , Kun Zhang , Chenyi Zhuang , Le Wu , Yong Li , Meng Wang

Modelling long-range dependencies is critical for scene understanding tasks in computer vision. Although convolution neural networks (CNNs) have excelled in many vision tasks, they are still limited in capturing long-range structured…

Computer Vision and Pattern Recognition · Computer Science 2022-09-21 Li Zhang , Mohan Chen , Anurag Arnab , Xiangyang Xue , Philip H. S. Torr

Traditional model-based diagnosis relies on constructing explicit system models, a process that can be laborious and expertise-demanding. In this paper, we propose a novel framework that combines concepts of model-based diagnosis with deep…

Artificial Intelligence · Computer Science 2023-10-11 Jan Lukas Augustin , Oliver Niggemann

Heterogeneous graph learning aims to capture complex relationships and diverse relational semantics among entities in a heterogeneous graph to obtain meaningful representations for nodes and edges. Recent advancements in heterogeneous graph…

Computation and Language · Computer Science 2024-05-21 Jiabin Tang , Yuhao Yang , Wei Wei , Lei Shi , Long Xia , Dawei Yin , Chao Huang

Discovery gene-disease links is important in biology and medicine areas, enabling disease identification and drug repurposing. Machine learning approaches accelerate this process by leveraging biological knowledge represented in ontologies…

Machine Learning · Computer Science 2025-04-14 Catarina Canastra , Cátia Pesquita

Knowledge Graphs have been one of the fundamental methods for integrating heterogeneous data sources. Integrating heterogeneous data sources is crucial, especially in the biomedical domain, where central data-driven tasks such as drug…

Machine Learning · Computer Science 2020-12-22 Islam Akef Ebeid , Majdi Hassan , Tingyi Wanyan , Jack Roper , Abhik Seal , Ying Ding

Recent advancements in Large Language Models (LLMs) have demonstrated significant promise in clinical diagnosis. However, current models struggle to emulate the iterative, diagnostic hypothesis-driven reasoning of real clinical scenarios.…

Computation and Language · Computer Science 2026-01-06 Qipeng Wang , Rui Sheng , Yafei Li , Huamin Qu , Yushi Sun , Min Zhu

In this work, we aim to leverage prior symbolic knowledge to improve the performance of deep models. We propose a graph embedding network that projects propositional formulae (and assignments) onto a manifold via an augmented Graph…

Artificial Intelligence · Computer Science 2019-10-30 Yaqi Xie , Ziwei Xu , Mohan S. Kankanhalli , Kuldeep S. Meel , Harold Soh

This paper proposes the problem of Deep Question Generation (DQG), which aims to generate complex questions that require reasoning over multiple pieces of information of the input passage. In order to capture the global structure of the…

Computation and Language · Computer Science 2020-04-28 Liangming Pan , Yuxi Xie , Yansong Feng , Tat-Seng Chua , Min-Yen Kan

In this paper, we propose a method for knowledge graph construction in power distribution networks. This method leverages entity features, which involve their semantic, phonetic, and syntactic characteristics, in both the knowledge graph of…

Computation and Language · Computer Science 2024-01-30 Xiang Li , Che Wang , Bing Li , Hao Chen , Sizhe Li

Brain connectivity alternations associated with brain disorders have been widely reported in resting-state functional imaging (rs-fMRI) and diffusion tensor imaging (DTI). While many dual-modal fusion methods based on graph neural networks…

Computer Vision and Pattern Recognition · Computer Science 2024-11-14 Feiyu Yin , Yu Lei , Siyuan Dai , Wenwen Zeng , Guoqing Wu , Liang Zhan , Jinhua Yu

Heterogeneous graph is a kind of data structure widely existing in real life. Nowadays, the research of graph neural network on heterogeneous graph has become more and more popular. The existing heterogeneous graph neural network algorithms…

Artificial Intelligence · Computer Science 2021-06-28 Xinliang Wu , Mengying Jiang , Guizhong Liu

We present a novel system that automatically extracts and generates informative and descriptive sentences from the biomedical corpus and facilitates the efficient search for relational knowledge. Unlike previous search engines or…

Computation and Language · Computer Science 2023-10-19 Kerui Zhu , Jie Huang , Kevin Chen-Chuan Chang

Recently, a considerable literature has grown up around the theme of Graph Convolutional Network (GCN). How to effectively leverage the rich structural information in complex graphs, such as knowledge graphs with heterogeneous types of…

Machine Learning · Computer Science 2021-04-26 Donghan Yu , Yiming Yang , Ruohong Zhang , Yuexin Wu

The global shortage and uneven distribution of medical expertise continue to hinder equitable access to accurate diagnostic care. While existing intelligent diagnostic system have shown promise, most struggle with dual-user interaction, and…

Human-Computer Interaction · Computer Science 2026-01-29 Zihan Zhou , Yinan Liu , Yuyang Xie , Bin Wang , Xiaochun Yang , Zezheng Feng

Attention-Deficit/Hyperactivity Disorder (ADHD) is a challenging disorder to study due to its complex symptomatology and diverse contributing factors. To explore how we can gain deeper insights on this topic, we performed a network analysis…

Social and Information Networks · Computer Science 2025-04-16 Hakan T. Otal , Stephen V. Faraone , M. Abdullah Canbaz

We consider the problem of learning efficient and inductive graph convolutional networks for text classification with a large number of examples and features. Existing state-of-the-art graph embedding based methods such as predictive text…

Computation and Language · Computer Science 2020-09-01 Rahul Ragesh , Sundararajan Sellamanickam , Arun Iyer , Ram Bairi , Vijay Lingam

The ongoing need for effective epidemic modeling has driven advancements in capturing the complex dynamics of infectious diseases. Traditional models, such as Susceptible-Infected-Recovered, and graph-based approaches often fail to account…

Social and Information Networks · Computer Science 2025-04-02 Songyuan Liu , Shengbo Gong , Tianning Feng , Zewen Liu , Max S. Y. Lau , Wei Jin

Commonsense question answering aims to answer questions which require background knowledge that is not explicitly expressed in the question. The key challenge is how to obtain evidence from external knowledge and make predictions based on…

Computation and Language · Computer Science 2020-06-11 Shangwen Lv , Daya Guo , Jingjing Xu , Duyu Tang , Nan Duan , Ming Gong , Linjun Shou , Daxin Jiang , Guihong Cao , Songlin Hu