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To model the evolution of diseases with extended latency periods and the presence of asymptomatic patients like COVID-19, we define a simple discrete time stochastic SIR-type epidemic model. We include both latent periods as well as the…

Populations and Evolution · Quantitative Biology 2020-05-14 Xavier Bardina , Marco Ferrante , Carles Rovira

We present three data driven model-types for COVID-19 with a minimal number of parameters to provide insights into the spread of the disease that may be used for developing policy responses. The first is exponential growth, widely studied…

Populations and Evolution · Quantitative Biology 2022-05-25 Andrea L. Bertozzi , Elisa Franco , George Mohler , Martin B. Short , Daniel Sledge

We study a fast-slow version of an SIRS epidemiological model on homogeneous graphs, obtained through the application of the moment closure method. We use GSPT to study the model, taking into account that the infection period is much…

Dynamical Systems · Mathematics 2021-12-30 Hildeberto Jardón-Kojakhmetov , Christian Kuehn , Andrea Pugliese , Mattia Sensi

We revisit the classic Susceptible-Infected-Recovered (SIR) epidemic model and one of its nonlocal variations recently developed in \cite{Guan}. We introduce several new approaches to derive exact analytical solutions in the classical…

Analysis of PDEs · Mathematics 2021-06-24 Li , Guan , Dong Li , Ke Wang , Kun Zhao

The recent COVID-19 pandemic has promoted vigorous scientific activity in an effort to understand, advice and control the pandemic. Data is now freely available at a staggering rate worldwide. Unfortunately, this unprecedented level of…

Applications · Statistics 2024-01-31 Yuansan Liu , Saransh Srivastava , Zuo Huang , Felisa J. Vázquez-Abad

We introduce a kinetic framework for modeling the time evolution of the statistical distributions of the population densities in the three compartments of susceptible, infectious, and recovered individuals, under epidemic spreading driven…

Analysis of PDEs · Mathematics 2025-12-16 Giorgio Martalò , Giuseppe Toscani , Mattia Zanella

In this paper we develop a SIR epidemiological model with parameters calculated according to existing data at the time of writing (24/03/2020); the data is from Italy, South Korea and Colombia, the model is then used to project the…

Populations and Evolution · Quantitative Biology 2020-09-28 Carlos Armando De Castro

We first generalise ideas discussed by Kiss et al. (2015) to prove a theorem for generating exact closures (here expressing joint probabilities in terms of their constituent marginal probabilities) for susceptible-infectious-removed (SIR)…

Populations and Evolution · Quantitative Biology 2015-04-27 Kieran J Sharkey , Robert R Wilkinson

In contrast to the common assumption in epidemic models that the rate of infection between individuals is constant, in reality, an individual's viral load determines their infectiousness. We compare the average and individual reproductive…

Populations and Evolution · Quantitative Biology 2021-12-07 Nicholas Landry

We present a compartmental SEIRD model aimed at forecasting hospital occupancy in metropolitan areas during the current COVID-19 outbreak. The model features asymptomatic and symptomatic infections with detailed hospital dynamics. We model…

Populations and Evolution · Quantitative Biology 2020-06-08 Marcos A. Capistran , Antonio Capella , J. Andres Christen

In this work, we adapt the epidemiological SIR model to study the evolution of the dissemination of COVID-19 in Germany and Brazil (nationally, in the State of Paraiba, and in the City of Campina Grande). We prove the well posedness and the…

Populations and Evolution · Quantitative Biology 2022-04-20 Adriano A. Batista , Severino Horácio da Silva

Standard epidemiological models for COVID-19 employ variants of compartment (SIR) models at local scales, implicitly assuming spatially uniform local mixing. Here, we examine the effect of employing more geographically detailed diffusion…

We study a simple realistic model for describing the diffusion of an infectious disease on a population of individuals. The dynamics is governed by a single functional delay differential equation, which, in the case of a large population,…

Populations and Evolution · Quantitative Biology 2020-09-28 Luca Dell'Anna

We study the Susceptible-Infected-Recovered (SIR) and the Susceptible-Exposed-Infected-Recovered (SEIR) models of epidemics, with possibly time-varying rates, on a class of networks that are locally tree-like, which includes sparse…

Probability · Mathematics 2023-09-22 Juniper Cocomello , Kavita Ramanan

In this work, the SIR epidemiological model is reformulated so to highlight the important {\em effective reproduction number}, as well as to account for the {\em generation time}, inverse of the {\em incidence rate}, and the {\em infectious…

Populations and Evolution · Quantitative Biology 2021-07-27 Ignazio Lazzizzera

We analytically study the SEIR (Susceptible Exposed Infectious Removed) epidemic model. The aim is to provide simple analytical expressions for the peak and asymptotic values and their characteristic times of the populations affected by the…

Populations and Evolution · Quantitative Biology 2020-12-29 Nicola Piovella

The COVID-19 pandemic has emphasized the need for a robust understanding of epidemic models. Current models of epidemics are classified as either mechanistic or non-mechanistic: mechanistic models make explicit assumptions on the dynamics…

Machine Learning · Statistics 2022-01-14 Arnab Sarker , Ali Jadbabaie , Devavrat Shah

This article describes a simple Susceptible Infected Recovered (SIR) model fitting with COVID-19 data for the month of march 2020 in New York (NY) state. The model is a classical SIR, but is non-autonomous; the rate of susceptible people…

Populations and Evolution · Quantitative Biology 2020-06-11 Benjamin Ambrosio , M. A. Aziz-Alaoui

As of November 2020, the number of COVID-19 cases is increasing rapidly in many countries. In Europe, the virus spread slowed considerably in the late spring due to strict lockdown, but a second wave of the pandemic grew throughout the…

Quantitative Methods · Quantitative Biology 2020-11-25 Kristoffer Rypdal , Filippo Maria Bianchi , Martin Rypdal

We propose a dynamical model for describing the spread of epidemics. This model is an extension of the SIQR (susceptible-infected-quarantined-recovered) and SIRP (susceptible-infected-recovered-pathogen) models used earlier to describe…

Physics and Society · Physics 2022-12-08 S. P. Lukyanets , I. S. Gandzha , O. V. Kliushnichenko