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Recent years have witnessed a tremendous growth using topological summaries, especially the persistence diagrams (encoding the so-called persistent homology) for analyzing complex shapes. Intuitively, persistent homology maps a potentially…

Computational Geometry · Computer Science 2021-04-19 Samantha Chen , Yusu Wang

Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function.…

Algebraic Topology · Mathematics 2018-12-26 Alessia Angeli , Massimo Ferri , Ivan Tomba

This paper presents an algorithm for the efficient approximation of the saddle-extremum persistence diagram of a scalar field. Vidal et al. introduced recently a fast algorithm for such an approximation (by interrupting a progressive…

Graphics · Computer Science 2021-08-13 Jules Vidal , Julien Tierny

Topological data analysis is an approach to study shape of a data set by means of topology. Its main object of study is the persistence diagram, which represents the topological features of the data set at different spatial resolutions.…

Algebraic Topology · Mathematics 2025-11-05 Azmeer Nordin , Mohd Salmi Md Noorani , Nurulkamal Masseran , Mohd Sabri Ismail , Nur Firyal Roslan

Graphs model real-world circumstances in many applications where they may constantly change to capture the dynamic behavior of the phenomena. Topological persistence which provides a set of birth and death pairs for the topological features…

Computational Geometry · Computer Science 2021-03-15 Tamal K. Dey , Tao Hou

Topological Data Analysis methods can be useful for classification and clustering tasks in many different fields as they can provide two dimensional persistence diagrams that summarize important information about the shape of potentially…

Quantum Physics · Physics 2024-09-02 Bernardo Ameneyro , Rebekah Herrman , George Siopsis , Vasileios Maroulas

Persistence diagrams have been widely used to quantify the underlying features of filtered topological spaces in data visualization. In many applications, computing distances between diagrams is essential; however, computing these distances…

Computational Geometry · Computer Science 2021-08-12 Yu Qin , Brittany Terese Fasy , Carola Wenk , Brian Summa

Persistence diagrams (PDs) are used as signatures of point cloud data. Two clouds of points can be compared using the bottleneck distance d_B between their PDs. A potential drawback of this pipeline is that point clouds sampled from…

Computational Geometry · Computer Science 2024-08-30 Nathan H. May , Bala Krishnamoorthy , Patrick Gambill

A fundamental question in computational geometry is for a set of input points in the Euclidean space, that is subject to discrete changes (insertion/deletion of points at each time step), whether it is possible to maintain an approximate…

Computational Geometry · Computer Science 2023-02-22 A. Karim Abu-Affash , Sujoy Bhore , Paz Carmi

Appropriately representing elements in a database so that queries may be accurately matched is a central task in information retrieval; recently, this has been achieved by embedding the graphical structure of the database into a manifold in…

Machine Learning · Statistics 2023-07-10 Yueqi Cao , Athanasios Vlontzos , Luca Schmidtke , Bernhard Kainz , Anthea Monod

In topological data analysis (TDA), persistence diagrams have been a succesful tool. To compare them, Wasserstein and Bottleneck distances are commonly used. We address the shortcomings of these metrics and show a way to investigate them in…

Computational Geometry · Computer Science 2024-09-27 Paweł Dłotko , Niklas Hellmer

Twin-width is a recently formulated graph and matrix invariant that intuitively quantifies how far a graph is from having the structural simplicity of a co-graph. Since its introduction in 2020, twin-width has received increasing attention…

Data Structures and Algorithms · Computer Science 2025-11-11 Andrei Arhire , Matei Chiriac , Radu Timofte

This work incorporates topological features via persistence diagrams to classify point cloud data arising from materials science. Persistence diagrams are multisets summarizing the connectedness and holes of given data. A new distance on…

Machine Learning · Statistics 2019-11-11 Vasileios Maroulas , Cassie Putman Micucci , Adam Spannaus

Homology features of spaces which appear in applications, for instance 3D meshes, are among the most important topological properties of these objects. Given a non-trivial cycle in a homology class, we consider the problem of computing a…

Computational Geometry · Computer Science 2022-03-18 Erin Wolf Chambers , Salman Parsa , Hannah Schreiber

This article studies the robust version of persistent homology based on trimming methodology to capture the geometric feature through support of the data in presence of outliers. Precisely speaking, the proposed methodology works when the…

Methodology · Statistics 2026-01-01 Tuhin Subhra Mahato , Subhra Sankar Dhar

Multi-parameter persistent homology is a recent branch of topological data analysis. In this area, data sets are investigated through the lens of homology with respect to two or more scale parameters. The high computational cost of many…

Algebraic Topology · Mathematics 2020-10-30 Michael Kerber , Alexander Rolle

One of the main reasons for topological persistence being useful in data analysis is that it is backed up by a stability (isometry) property: persistence diagrams of $1$-parameter persistence modules are stable in the sense that the…

Computational Geometry · Computer Science 2021-08-18 Tamal K. Dey , Cheng Xin

Computation of the interleaving distance between persistence modules is a central task in topological data analysis. For $1$-parameter persistence modules, thanks to the isometry theorem, this can be done by computing the bottleneck…

Computational Geometry · Computer Science 2019-10-07 Tamal K. Dey , Cheng Xin

The stability of persistence diagrams is among the most important results in applied and computational topology. Most results in the literature phrase stability in terms of the bottleneck distance between diagrams and the $\infty$-norm of…

Algebraic Topology · Mathematics 2025-07-11 Primoz Skraba , Katharine Turner

The \textit{biharmonic distance} (BD) is a fundamental metric that measures the distance of two nodes in a graph. It has found applications in network coherence, machine learning, and computational graphics, among others. In spite of BD's…

Social and Information Networks · Computer Science 2024-08-27 Changan Liu , Ahad N. Zehmakan , Zhongzhi Zhang
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