Related papers: A conjecture on different central parts of binary …

We prove polynomial upper and lower bounds on the expected size of the maximum agreement subtree of two random binary phylogenetic trees under both the uniform distribution and Yule-Harding distribution. This positively answers a question…

We consider a continuous time random walk on the rooted binary tree of depth $n$ with all transition rates equal to one and study its cover time, namely the time until all vertices of the tree have been visited. We prove that, normalized by…

Let $\mathcal{A}_1,\ldots,\mathcal{A}_m$ be families of $k$-subsets of an $n$-set. Suppose that one cannot choose pairwise disjoint edges from $s+1$ distinct families. Subject to this condition we investigate the maximum of…

Let $T$ be an $n$-node tree of maximum degree 4, and let $P$ be a set of $n$ points in the plane with no two points on the same horizontal or vertical line. It is an open question whether $T$ always has a planar drawing on $P$ such that…

In SODA'99, Chan introduced a simple type of planar straight-line upward order-preserving drawings of binary trees, known as LR drawings: such a drawing is obtained by picking a root-to-leaf path, drawing the path as a straight line, and…

Motivated from the study of eccentricity, center, and sum of eccentricities in graphs and trees, we introduce several new distance-based global and local functions based on the smallest distance from a vertex to some leaf (called the…

A family of sets is intersecting if every pair of its sets intersect. A star is a family with some element (a center) in each of its sets. The classical 1961 result of Erd\H{o}s, Ko, and Rado states that every intersecting family of r-sets…

We study the detection error probabilities associated with an M-ary relay tree, where the leaves of the tree correspond to identical and independent sensors. Only these leaves are sensors. The root of the tree represents a fusion center…

It is known from the algebraic graph theory that if $L$ is the Laplacian matrix of some tree $G$ with a vertex degree sequence $\mathbf{d}=(d_1, ..., d_n)^\top$ and $D$ is its distance matrix, then…

The pseudoforest version of the Strong Nine Dragon Tree Conjecture states that if a graph $G$ has maximum average degree $\text{mad}(G) = 2 \max_{H \subseteq G} \frac{e(G)}{v(G)}$ at most $2(k + \frac{d}{k+d+1})$, then it has a…

Given $d\geq 2$ and two rooted $d$-ary trees $D$ and $T$ such that $D$ has $k$ leaves, the density $\gamma(D,T)$ of $D$ in $T$ is the proportion of all $k$-element subsets of leaves of $T$ that induce a tree isomorphic to $D$, after erasing…

We solve a class of optimization problems for (phylogenetic) $X$-trees or their shapes. These problems have recently appeared in different contexts, e.g. in the context of the impact of tree shapes on the size of TBR neighborhoods, but so…

Rooted trees are essential for describing numerical schemes via the so-called B-series. They have also been used extensively in rough analysis for expanding solutions of singular Stochastic Partial Differential Equations (SPDEs). When one…

The rooted subtree prune and regraft (rSPR) distance between two rooted binary phylogenetic trees is a well-studied measure of topological dissimilarity that is NP-hard to compute. Here we describe an improved linear kernel for the problem.…

We obtain new non-asymptotic tail bounds for the height of uniformly random trees with a given degree sequence, simply generated trees and conditioned Bienaym\'e trees (the family trees of branching processes), in the process settling three…

Rotation distance measures the difference in shape between binary trees of the same size by counting the minimum number of rotations needed to transform one tree to the other. We describe several types of rotation distance where…

We look at a family of meta-Fibonacci sequences which arise in studying the number of leaves at the largest level in certain infinite sequences of binary trees, restricted compositions of an integer, and binary compact codes. For this…

We investigate a network growth model in which the genealogy controls the evolution. In this model, a new node selects a random target node and links either to this target node, or to its parent, or to its grandparent, etc; all nodes from…

In the longest plane spanning tree problem, we are given a finite planar point set $\mathcal{P}$, and our task is to find a plane (i.e., noncrossing) spanning tree for $\mathcal{P}$ with maximum total Euclidean edge length. Despite more…

Best match graphs (BMG) are a key intermediate in graph-based orthology detection and contain a large amount of information on the gene tree. We provide a near-cubic algorithm to determine whether a BMG is binary-explainable, i.e., whether…