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We give more precise statements of Fock-Goncharov duality conjecture for cluster varieties parametrizing ${\rm SL}_{2}/{\rm PGL}_{2}$-local systems on the once punctured torus. Then we prove these statements. Along the way, using distinct…

Algebraic Geometry · Mathematics 2020-03-13 Yan Zhou

We develop basic cluster theory from an elementary point of view using a variation of binary trees which we call mixed cobinary trees. We show that the number of isomorphism classes of such trees is given by the Catalan number Cn where n is…

Combinatorics · Mathematics 2013-08-12 Kiyoshi Igusa , Jonah Ostroff

A major direction in the theory of cluster algebras is to construct (quantum) cluster algebra structures on the (quantized) coordinate rings of various families of varieties arising in Lie theory. We prove that all algebras in a very large…

Quantum Algebra · Mathematics 2015-08-14 K. R. Goodearl , M. T. Yakimov

A cluster tree provides a highly-interpretable summary of a density function by representing the hierarchy of its high-density clusters. It is estimated using the empirical tree, which is the cluster tree constructed from a density…

Statistics Theory · Mathematics 2017-02-14 Jisu Kim , Yen-Chi Chen , Sivaraman Balakrishnan , Alessandro Rinaldo , Larry Wasserman

In the present paper we examine the relationship between several type $A$ cluster theories and structures. We define a 2D geometric model of a cluster theory, which generalizes cluster algebras from surfaces, and encode several existing…

Representation Theory · Mathematics 2022-01-03 Job Daisie Rock

Categorical sequence clustering plays a crucial role in various fields, but the lack of interpretability in cluster assignments poses significant challenges. Sequences inherently lack explicit features, and existing sequence clustering…

Machine Learning · Computer Science 2023-09-06 Junjie Dong , Xinyi Yang , Mudi Jiang , Lianyu Hu , Zengyou He

In this paper we consider a refinement, due to Nathanson, of the Calkin-Wilf tree. In particular, we study the properties of such trees associated with the matrices $L_u=\begin{bmatrix} 1 & 0 \\ u & 1\end{bmatrix}$ and $R_v=\begin{bmatrix}…

Number Theory · Mathematics 2020-01-30 Sandie Han , Ariane M. Masuda , Satyanand Singh , Johann Thiel

Tree structures appear in many fields of the life sciences, including phylogenetics, developmental biology and nucleic acid structures. Trees can be used to represent RNA secondary structures, which directly relate to the function of…

Machine Learning · Computer Science 2026-01-22 Pengyu Liu , Mariel Vázquez , Nataša Jonoska

We develop a general theory of cluster categories, applying to a 2-Calabi-Yau extriangulated category $\mathcal{C}$ and cluster-tilting subcategory $\mathcal{T}$ satisfying only mild finiteness conditions. We show that the structure theory…

Representation Theory · Mathematics 2025-12-01 Jan E. Grabowski , Matthew Pressland

Rooted acyclic graphs appear naturally when the phylogenetic relationship of a set $X$ of taxa involves not only speciations but also recombination, horizontal transfer, or hybridization, that cannot be captured by trees. A variety of…

Populations and Evolution · Quantitative Biology 2022-04-29 Marc Hellmuth , David Schaller , Peter F. Stadler

There is a well-known bijection between finite binary sequences and integer partitions. Sequences of length r correspond to partitions of perimeter r+1. Motivated by work on rational numbers in the Calkin-Wilf tree, we classify partitions…

Combinatorics · Mathematics 2024-07-04 David J. Hemmer , Karlee J. Westrem

Explaining why and how a tree $t$ structurally differs from another tree $t^\star$ is a question that is encountered throughout computer science, including in understanding tree-structured data such as XML or JSON data. In this article, we…

Machine Learning · Computer Science 2025-02-19 Daniel Neider , Leif Sabellek , Johannes Schmidt , Fabian Vehlken , Thomas Zeume

An order-theoretic forest is a countable partial order such that the set of elements larger than any element is linearly ordered. It is an order-theoretic tree if any two elements have an upper-bound. The order type of a branch can be any…

Logic in Computer Science · Computer Science 2023-06-22 Bruno Courcelle

We introduce a cluster evaluation technique called Tree Index. Our Tree Index algorithm aims at describing the structural information of the clustering rather than the quantitative format of cluster-quality indexes (where the representation…

Machine Learning · Computer Science 2020-03-25 A. H. Beg , Md Zahidul Islam , Vladimir Estivill-Castro

The undirected technique for evaluating belief networks [Jensen, et.al., 1990, Lauritzen and Spiegelhalter, 1988] requires clustering the nodes in the network into a junction tree. In the traditional view, the junction tree is constructed…

Artificial Intelligence · Computer Science 2013-02-21 Denise L. Draper

Tropical rainforests exhibit a rich repertoire of spatial patterns emerging from the intricate relationship between the microscopic interaction between species. In particular, the distribution of vegetation clusters can shed much light on…

Statistical Mechanics · Physics 2024-09-04 Pablo Villegas , Tommaso Gili , Guido Caldarelli , Andrea Gabrielli

We demonstrate the versatility of the tangle-tree duality theorem for abstract separation systems by using it to prove tree-of-tangles theorems. This approach allows us to strengthen some of the existing tree-of-tangles theorems by bounding…

Combinatorics · Mathematics 2025-05-20 Christian Elbracht , Jay Lilian Kneip , Maximilian Teegen

Clustering is a popular form of unsupervised learning for geometric data. Unfortunately, many clustering algorithms lead to cluster assignments that are hard to explain, partially because they depend on all the features of the data in a…

Machine Learning · Computer Science 2020-09-23 Sanjoy Dasgupta , Nave Frost , Michal Moshkovitz , Cyrus Rashtchian

We examine statistical properties of the Calkin--Wilf tree and give number-theoretical applications.

Number Theory · Mathematics 2008-09-23 Giedrius Alkauskas , Jörn Steuding

In the acyclic case, we establish a one-to-one correspondence between the tilting objects of the cluster category and the clusters of the associated cluster algebra. This correspondence enables us to solve conjectures on cluster algebras.…

Representation Theory · Mathematics 2007-05-23 Philippe Caldero , Bernhard Keller