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Microbiomes are a vital part of the human body, engaging in tasks like food digestion and immune defense. Their structure and function must be understood in order to promote host health and facilitate swift recovery during disease. Due to…

Human-Computer Interaction · Computer Science 2025-09-01 Simon Burbach , Maria Maleshkova , Florian Centler , Tanja Joan Schmidt

We present a collection of new, open-source computational tools for numerically modeling recent large-scale observational data sets using modern cosmology theory. Specifically, these tools will allow both students and researchers to…

Cosmology and Nongalactic Astrophysics · Physics 2013-05-22 Jacob Moldenhauer , Larry Engelhardt , Keenan Stone , Ezekiel Shuler

For centuries, the rich nocturnal environment of the starry sky could be modelled only by analogue tools such as paper planispheres, atlases, globes and numerical tables. The immersive sky simulator of the twentieth century, the…

Instrumentation and Methods for Astrophysics · Physics 2021-04-05 Georg Zotti , Susanne M Hoffmann , Alexander Wolf , Fabien Chéreau , Guillaume Chéreau

Though the mediums for visualization are limited, the potential dimensions of a dataset are not. In many areas of scientific study, understanding the correlations between those dimensions and their uncertainties is pivotal to mining useful…

Astrophysics · Physics 2009-02-25 Steve Haroz , Kwan-Liu Ma , Katrin Heitmann

The rapid growth in scale and complexity of both computational and observational astrophysics over the past decade necessitates efficient and intuitive methods for examining and visualizing large datasets. Here, I present {\it AstroBlend},…

Instrumentation and Methods for Astrophysics · Physics 2016-02-11 J. P. Naiman

Plasmodium of Physarum polycephalum is a single cell visible by unaided eye. During its foraging behavior the cell spans spatially distributed sources of nutrients with a protoplasmic network. Geometrical structure of the protoplasmic…

Pattern Formation and Solitons · Physics 2015-03-17 Andrew Adamatzky , Genaro J. Martinez , Sergio V. Chapa-Vergara , Rene Asomoza-Palacio , Christopher R. Stephens

The slime mould Physarum polycephalum has been used in developing unconventional computing devices for in which the slime mould played a role of a sensing, actuating, and computing device. These devices treated the slime mould rather as an…

Plasmodium of Physarum polycephalum is a single cell visible by unaided eye. During its foraging behaviour the cell spans spatially distributed sources of nutrients with a protoplasmic network. Geometrical structure of the protoplasmic…

Pattern Formation and Solitons · Physics 2015-05-14 Andrew Adamatzky , Jeff Jones

We present Firefly, a new browser-based interactive tool for visualizing 3D particle data sets. On a typical personal computer, Firefly can simultaneously render and enable real-time interactions with > ~10 million particles, and can…

Instrumentation and Methods for Astrophysics · Physics 2023-07-24 Alexander B. Gurvich , Aaron M. Geller

Understanding astrophysical and cosmological processes can be challenging due to their complexity and lack of intuitive analogies. To address this, we present \texttt{AstronomyCalc}, a Python package specifically designed to aid…

Physics Education · Physics 2025-11-26 Sambit K. Giri

Astronomical researchers often think of analysis and visualization as separate tasks. In the case of high-dimensional data sets, though, interactive exploratory data visualization can give far more insight than an approach where data…

Instrumentation and Methods for Astrophysics · Physics 2015-06-05 Alyssa A. Goodman

In this paper we show how advanced visualization tools can help the researcher in investigating and extracting information from data. The focus is on VisIVO, a novel open source graphics application, which blends high performance…

We present PolyHoop, a lightweight standalone C++ implementation of a mechanical model to simulate the dynamics of soft particles and cellular tissues in two dimensions. With only few geometrical and physical parameters, PolyHoop is capable…

Soft Condensed Matter · Physics 2024-02-22 Roman Vetter , Steve V. M. Runser , Dagmar Iber

Insect swarms are common phenomena in nature and therefore have been actively pursued in computer animation. Realistic insect swarm simulation is difficult due to two challenges: high-fidelity behaviors and large scales, which make the…

Graphics · Computer Science 2020-07-23 Wei Xiang , Xinran Yao , He Wang , Xiaogang Jin

Scientists often explore and analyze large-scale scientific simulation data by leveraging two- and three-dimensional visualizations. The data and tasks can be complex and therefore best supported using myriad display technologies, from…

Human-Computer Interaction · Computer Science 2024-04-30 Thomas Marrinan , Madeleine Moeller , Alina Kanayinkal , Victor A. Mateevitsi , Michael E. Papka

Spectropolarimetry, the observation of polarization and intensity as a function of wavelength, is a powerful tool in stellar astrophysics. It is particularly useful for characterizing stars and circumstellar material, and for tracing the…

Rapidly growing data sizes of scientific simulations pose significant challenges for interactive visualization and analysis techniques. In this work, we propose a compact probabilistic representation to interactively visualize large…

Graphics · Computer Science 2020-10-16 Tobias Rapp , Christoph Peters , Carsten Dachsbacher

Understanding how cosmological parameters influence the cosmic microwave background (CMB) power spectra is a central component of modern cosmology education, but interactive exploration is often limited by computational cost or technical…

Instrumentation and Methods for Astrophysics · Physics 2026-01-26 Andreas Nygaard , Steen Hannestad , Thomas Tram

Petabyte-scale data volumes are generated by observations and simulations in modern astronomy and astrophysics. Storage, access, and data analysis are significantly hampered by such data volumes and are leading to the development of a new…

Instrumentation and Methods for Astrophysics · Physics 2025-08-29 Eva Sciacca , Nicola Tuccari , Fabio Vitello , Valentina Cesare