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In generating large quantities of DNA data, high-throughput sequencing technologies require advanced bioinformatics infrastructures for efficient data analysis. k-mer counting, the process of quantifying the frequency of fixed-length k DNA…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-11 Yifan Li , Giulia Guidi

Deep learning involves a difficult non-convex optimization problem with a large number of weights between any two adjacent layers of a deep structure. To handle large data sets or complicated networks, distributed training is needed, but…

To improve the utility of learning applications and render machine learning solutions feasible for complex applications, a substantial amount of heavy computations is needed. Thus, it is essential to delegate the computations among several…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-29 Homa Esfahanizadeh , Alejandro Cohen , Muriel Medard

This paper is an extension to the memory retrieval procedure of the B-Matrix approach [6],[17] to neural network learning. The B-Matrix is a part of the interconnection matrix generated from the Hebbian neural network, and in memory…

Neural and Evolutionary Computing · Computer Science 2011-03-15 Prerana Laddha

In distributed machine learning, data is dispatched to multiple machines for processing. Motivated by the fact that similar data points often belong to the same or similar classes, and more generally, classification rules of high accuracy…

Machine Learning · Computer Science 2016-12-16 Travis Dick , Mu Li , Venkata Krishna Pillutla , Colin White , Maria Florina Balcan , Alex Smola

A scalable algorithm for solving compact banded linear systems on distributed memory architectures is presented. The proposed method factorizes the original system into two levels of memory hierarchies, and solves it using parallel cyclic…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-05 Hang Song , Kristen V. Matsuno , Jacob R. West , Akshay Subramaniam , Aditya S. Ghate , Sanjiva K. Lele

Unsupervised dimensionality reduction is one of the commonly used techniques in the field of high dimensional data recognition problems. The deep autoencoder network which constrains the weights to be non-negative, can learn a low…

Computer Vision and Pattern Recognition · Computer Science 2020-09-18 Anyong Qin , Zhaowei Shang , Zhuolin Tan , Taiping Zhang , Yuan Yan Tang

We present a distributed framework of the Primal-Dual Hybrid Gradient (PDHG) algorithm for solving massive-scale linear programming (LP) problems. Although PDHG-based solvers demonstrate strong performance on single-node GPU architectures,…

Optimization and Control · Mathematics 2026-05-11 Hongpei Li , Yicheng Huang , Huikang Liu , Dongdong Ge , Yinyu Ye

Current deep learning architectures are growing larger in order to learn from complex datasets. These architectures require giant matrix multiplication operations to train millions of parameters. Conversely, there is another growing trend…

Machine Learning · Statistics 2016-12-06 Ryan Spring , Anshumali Shrivastava

We study computational aspects of the nonparametric maximum likelihood estimator (NPMLE) for the distribution function of bivariate interval censored data. The computation of the NPMLE consists of two steps: a parameter reduction step and…

Computation · Statistics 2012-01-12 Marloes H. Maathuis

We propose an efficient distributed out-of-memory implementation of the Non-negative Matrix Factorization (NMF) algorithm for heterogeneous high-performance-computing (HPC) systems. The proposed implementation is based on prior work on…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-14 Ismael Boureima , Manish Bhattarai , Maksim Eren , Erik Skau , Philip Romero , Stephan Eidenbenz , Boian Alexandrov

Distributed systems can be found in various applications, e.g., in robotics or autonomous driving, to achieve higher flexibility and robustness. Thereby, data flow centric applications such as Deep Neural Network (DNN) inference benefit…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-14 Fabian Kreß , El Mahdi El Annabi , Tim Hotfilter , Julian Hoefer , Tanja Harbaum , Juergen Becker

In this paper, we consider distributed algorithms for solving the empirical risk minimization problem under the master/worker communication model. We develop a distributed asynchronous quasi-Newton algorithm that can achieve superlinear…

Optimization and Control · Mathematics 2019-06-11 Saeed Soori , Konstantin Mischenko , Aryan Mokhtari , Maryam Mehri Dehnavi , Mert Gurbuzbalaban

Despite their tremendous success and versatility, Deep Neural Networks (DNNs) such as Large Language Models (LLMs) suffer from inference inefficiency and rely on advanced computational infrastructure. To address these challenges and make…

Machine Learning · Computer Science 2025-05-05 Mohsen Dehghankar , Mahdi Erfanian , Abolfazl Asudeh

In this paper, we propose a bootstrap method applied to massive data processed distributedly in a large number of machines. This new method is computationally efficient in that we bootstrap on the master machine without over-resampling,…

Machine Learning · Statistics 2020-02-21 Yang Yu , Shih-Kang Chao , Guang Cheng

Multicast data transfers occur in many distributed systems and applications (e.g. IPTV, Grids, content delivery networks). Because of this, efficient multicast data distribution optimization techniques are required. In the first part of…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-06-03 Mugurel Ionut Andreica , Eliana-Dina Tirsa , Nicolae Tapus

Network embedding is an important step in many different computations based on graph data. However, existing approaches are limited to small or middle size graphs with fewer than a million edges. In practice, web or social network graphs…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-09 Sara Riazi , Boyana Norris

We analyze the problem of discovering dependencies from distributed big data. Existing (non-distributed) algorithms focus on minimizing computation by pruning the search space of possible dependencies. However, distributed algorithms must…

Databases · Computer Science 2019-03-14 Hemant Saxena , Lukasz Golab , Ihab F. Ilyas

In this paper, a novel distributed scheduling algorithm is proposed, which aims to efficiently schedule both the uplink and downlink backhaul traffic in the relay-assisted mmWave backhaul network with a tree topology. The handshaking of…

Networking and Internet Architecture · Computer Science 2022-02-17 Qiang Hu , Yuchen Liu , Yan Yan , Miao Liu , Jun Zheng , Douglas M. Blough

We consider the problem of designing codes with flexible rate (referred to as rateless codes), for private distributed matrix-matrix multiplication. A master server owns two private matrices $\mathbf{A}$ and $\mathbf{B}$ and hires worker…

Information Theory · Computer Science 2021-01-15 Rawad Bitar , Marvin Xhemrishi , Antonia Wachter-Zeh
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