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Biomedical text mining is becoming increasingly important as the number of biomedical documents rapidly grows. With the progress in natural language processing (NLP), extracting valuable information from biomedical literature has gained…

Computation and Language · Computer Science 2019-10-21 Jinhyuk Lee , Wonjin Yoon , Sungdong Kim , Donghyeon Kim , Sunkyu Kim , Chan Ho So , Jaewoo Kang

Inspired by the success of the General Language Understanding Evaluation benchmark, we introduce the Biomedical Language Understanding Evaluation (BLUE) benchmark to facilitate research in the development of pre-training language…

Computation and Language · Computer Science 2019-06-19 Yifan Peng , Shankai Yan , Zhiyong Lu

Developing high-performance entity normalization algorithms that can alleviate the term variation problem is of great interest to the biomedical community. Although deep learning-based methods have been successfully applied to biomedical…

Information Retrieval · Computer Science 2019-08-12 Zongcheng Ji , Qiang Wei , Hua Xu

Chinese medical question-answer matching is more challenging than the open-domain question answer matching in English. Even though the deep learning method has performed well in improving the performance of question answer matching, these…

Computation and Language · Computer Science 2020-11-30 Xiongtao Cui , Jungang Han

This paper presents several BERT-based models for Russian language biomedical text mining (RuBioBERT, RuBioRoBERTa). The models are pre-trained on a corpus of freely available texts in the Russian biomedical domain. With this pre-training,…

Computation and Language · Computer Science 2022-04-11 Alexander Yalunin , Alexander Nesterov , Dmitriy Umerenkov

Although pre-trained contextualized language models such as BERT achieve significant performance on various downstream tasks, current language representation still only focuses on linguistic objective at a specific granularity, which may…

Computation and Language · Computer Science 2021-01-01 Yian Li , Hai Zhao

Recent advances in natural language processing (NLP) have been driven bypretrained language models like BERT, RoBERTa, T5, and GPT. Thesemodels excel at understanding complex texts, but biomedical literature, withits domain-specific…

Computation and Language · Computer Science 2025-07-28 K. Sahit Reddy , N. Ragavenderan , Vasanth K. , Ganesh N. Naik , Vishalakshi Prabhu , Nagaraja G. S

Bidirectional Encoder Representations from Transformers (BERT) has shown marvelous improvements across various NLP tasks, and consecutive variants have been proposed to further improve the performance of the pre-trained language models. In…

Computation and Language · Computer Science 2020-12-14 Yiming Cui , Wanxiang Che , Ting Liu , Bing Qin , Shijin Wang , Guoping Hu

Bidirectional Encoder Representations from Transformers (BERT) have shown to be a promising way to dramatically improve the performance across various Natural Language Processing tasks [Devlin et al., 2019]. Meanwhile, progress made over…

Computation and Language · Computer Science 2021-03-02 Zhuo Xu

Machine Reading Comprehension (MRC) aims to extract answers to questions given a passage. It has been widely studied recently, especially in open domains. However, few efforts have been made on closed-domain MRC, mainly due to the lack of…

Computation and Language · Computer Science 2021-08-23 Taolin Zhang , Chengyu Wang , Minghui Qiu , Bite Yang , Xiaofeng He , Jun Huang

Pre-training large-scale neural language models on raw texts has made a significant contribution to improving transfer learning in natural language processing (NLP). With the introduction of transformer-based language models, such as…

Computation and Language · Computer Science 2024-05-08 Shoya Wada , Toshihiro Takeda , Shiro Manabe , Shozo Konishi , Jun Kamohara , Yasushi Matsumura

Bidirectional Encoder Representations from Transformers (BERT) has shown marvelous improvements across various NLP tasks, and its consecutive variants have been proposed to further improve the performance of the pre-trained language models.…

Computation and Language · Computer Science 2021-11-29 Yiming Cui , Wanxiang Che , Ting Liu , Bing Qin , Ziqing Yang

Chinese word segmentation (CWS) is a fundamental task for Chinese language understanding. Recently, neural network-based models have attained superior performance in solving the in-domain CWS task. Last year, Bidirectional Encoder…

Computation and Language · Computer Science 2019-09-23 Haiqin Yang

Chinese pre-trained language models usually process text as a sequence of characters, while ignoring more coarse granularity, e.g., words. In this work, we propose a novel pre-training paradigm for Chinese -- Lattice-BERT, which explicitly…

Computation and Language · Computer Science 2021-05-31 Yuxuan Lai , Yijia Liu , Yansong Feng , Songfang Huang , Dongyan Zhao

Artificial Intelligence (AI), along with the recent progress in biomedical language understanding, is gradually changing medical practice. With the development of biomedical language understanding benchmarks, AI applications are widely used…

Pre-trained language models (PLMs), such as BERT and GPT, have revolutionized the field of NLP, not only in the general domain but also in the biomedical domain. Most prior efforts in building biomedical PLMs have resorted simply to domain…

Computation and Language · Computer Science 2022-03-03 Quan Wang , Songtai Dai , Benfeng Xu , Yajuan Lyu , Yong Zhu , Hua Wu , Haifeng Wang

In the current environment, psychological issues are prevalent and widespread, with social media serving as a key outlet for individuals to share their feelings. This results in the generation of vast quantities of data daily, where…

Computation and Language · Computer Science 2024-06-13 Wei Zhai , Hongzhi Qi , Qing Zhao , Jianqiang Li , Ziqi Wang , Han Wang , Bing Xiang Yang , Guanghui Fu

Recent pretraining models in Chinese neglect two important aspects specific to the Chinese language: glyph and pinyin, which carry significant syntax and semantic information for language understanding. In this work, we propose ChineseBERT,…

Computation and Language · Computer Science 2021-07-01 Zijun Sun , Xiaoya Li , Xiaofei Sun , Yuxian Meng , Xiang Ao , Qing He , Fei Wu , Jiwei Li

Despite the development of pre-trained language models (PLMs) significantly raise the performances of various Chinese natural language processing (NLP) tasks, the vocabulary for these Chinese PLMs remain to be the one provided by Google…

Computation and Language · Computer Science 2020-11-18 Wei Zhu

Bidirectional Encoder Representations from Transformers or BERT~\cite{devlin-etal-2019-bert} has been one of the base models for various NLP tasks due to its remarkable performance. Variants customized for different languages and tasks are…

Computation and Language · Computer Science 2022-11-22 Ting Han , Kunhao Pan , Xinyu Chen , Dingjie Song , Yuchen Fan , Xinyu Gao , Ruyi Gan , Jiaxing Zhang
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