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Estimation of epidemiological and population parameters from molecular sequence data has become central to the understanding of infectious disease dynamics. Various models have been proposed to infer details of the dynamics that describe…

Populations and Evolution · Quantitative Biology 2014-12-25 Alex Popinga , Tim Vaughan , Tanja Stadler , Alexei Drummond

The spread of certain diseases can be promoted, in some cases substantially, by prior infection with another disease. One example is that of HIV, whose immunosuppressant effects significantly increase the chances of infection with other…

Physics and Society · Physics 2014-08-04 M. E. J. Newman , C. R. Ferrario

The propagation of infectious diseases and its impact on individuals play a major role in disease dynamics, and it is important to incorporate population heterogeneity into efforts to study diseases. As a simplistic but illustrative…

Populations and Evolution · Quantitative Biology 2019-07-24 Juan G. Calvo , Alberto Hernández , Mason A. Porter , Fabio Sanchez

We study a discrete Susceptible-Infected-Recovered (SIR) model for the spread of infectious disease on a homogeneous tree and the limit behavior of the model in the case when the tree vertex degree tends to infinity. We obtain the…

Probability · Mathematics 2022-07-08 Alexander Gairat , Vadim Shcherbakov

We consider an epidemic model of SIR type set on a homogeneous tree and investigate the spreading properties of the epidemic as a function of the degree of the tree, the intrinsic basic reproduction number and the strength of the…

Analysis of PDEs · Mathematics 2021-06-09 Christophe Besse , Grégory Faye

We study the interplay between epidemic dynamics and human decision making for epidemics that involve reinfection risk; in particular, the susceptible-infected-susceptible (SIS) and the susceptible-infected-recovered-infected (SIRI)…

Systems and Control · Electrical Eng. & Systems 2023-05-31 Abhisek Satapathi , Narendra Kumar Dhar , Ashish R. Hota , Vaibhav Srivastava

We have derived the governing equations for an SIR model with delay terms in both the infectivity and recovery of the disease. The equations are derived by modelling the dynamics as a continuous time random walk, where individuals move…

Dynamical Systems · Mathematics 2024-10-14 Christopher N. Angstmann , Stuart-James M. Burney , Anna V. McGann , Zhuang Xu

We use a stochastic Markovian dynamics approach to describe the spreading of vector-transmitted diseases, like dengue, and the threshold of the disease. The coexistence space is composed by two structures representing the human and mosquito…

Populations and Evolution · Quantitative Biology 2013-01-01 David R. Souza , Tânia Tomé , Suani T. R. Pinho , Florisneide R. Barreto , Mário J. de Oliveira

This paper analyses an SIRS-type model for infectious diseases with account for behavioural changes associated with the simultaneous spread of awareness in the population. Two types of awareness are included into the model: private…

Populations and Evolution · Quantitative Biology 2017-02-17 G. O. Agaba , Y. N. Kyrychko , K. B. Blyuss

We use a multitype continuous time Markov branching process model to describe the dynamics of the spread of parasites of two types that can mutate into each other in a common host population. Instead of using a single virulence…

Probability · Mathematics 2011-09-02 Konstantin Borovkov , Robert Day , Timothy Rice

The impact of spatial structure on the spread of an epidemic is an important issue in the propagation of infectious diseases. Recent studies, both deterministic and stochastic, have made it possible to understand the importance of the…

Probability · Mathematics 2023-01-09 Alphonse Emakoua

We numerically study the dynamics of the SIR disease model on small-world networks by using a large-deviation approach. This allows us to obtain the probability density function of the total fraction of infected nodes and of the maximum…

Physics and Society · Physics 2022-09-01 Yannick Feld , Alexander K. Hartmann

A theoretical framework for the description of Susceptible-Infected-Removed (SIR) spreading processes with synergistic transmission of infection on a lattice is developed. The model incorporates explicitly the effects of a time-dependent…

Populations and Evolution · Quantitative Biology 2013-12-25 Sergei Taraskin , Francisco J. Pérez-Reche

We propose a mathematical model to analyze the effects of anti-infection behavior on the equilibrium states of an infectious disease. The anti-infection behavior is incorporated into a classical epidemiological SIR model, by considering the…

Populations and Evolution · Quantitative Biology 2020-09-11 Andrés David Báez-Sánchez , Nara Bobko

We introduce a stochastic SIR-type partial differential equation model incorporating random diffusion, reinfection, vital dynamics, and a randomly varying transmission rate. For the associated random dynamical system, we prove the existence…

We consider a spatial SIR epidemic model where the infectivity of infected individuals depends upon their age of infection, and infections are non local. The domain is an unbounded subset of $\R^d$,and the individuals do not move. We extend…

Probability · Mathematics 2025-11-18 Armand Kanga , Etienne Pardoux

In this work, we use a new approach to study the spread of an infectious disease. Indeed, we study a SIR epidemic model with variable infectivity, where the individuals are distributed over a compact subset $D$ of $\R^d$. We define…

Probability · Mathematics 2025-11-18 Armand Kanga , Etienne Pardoux

We study an individual-based stochastic SIR epidemic model with infection-age dependent infectivity on a large random graph, capturing individual heterogeneity and non-homogeneous connectivity. Each individual is associated with particular…

Probability · Mathematics 2026-02-11 Guodong Pang , Étienne Pardoux , Aurélien Velleret

Contemporary epidemiological models often involve spatial variation, providing an avenue to investigate the averaged dynamics of individual movements. In this work, we extend a recent model by Vaziry, Kolokolnikov, and Kevrekidis [Royal…

Populations and Evolution · Quantitative Biology 2024-10-01 Maryam Ahmadpoortorkamani , Alexei Cheviakov

Susceptible-Invective-Recovered (SIR) mathematical models are in high demand due to the COVID-19 pandemic. They are used in their standard formulation, or through the many variants, trying to fit and hopefully predict the number of new…

Populations and Evolution · Quantitative Biology 2020-05-19 Ben-Hur Francisco Cardoso , Sebastián Gonçalves