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At the onset of the Covid-19 pandemic, a number of non-pharmaceutical interventions have been implemented in order to reduce transmission, thus leading to multiple phases of transmission. The disease reproduction number $R_t$, a way of…

Applications · Statistics 2023-05-03 Petros Barmpounakis , Nikolaos Demiris

The statistics of outbreaks in a model for the propagation of meningococcal diseases is analyzed, taking into account the possibility that the population is fragmented into weakly connected patches. It is shown that, depending on the size…

Populations and Evolution · Quantitative Biology 2007-05-23 F. Guinea , V. A. A. Jansen , N. Stollenwerk

We review and introduce a generalized reaction-diffusion approach to epidemic spreading in a metapopulation modeled as a complex network. The metapopulation consists of susceptible and infected individuals that are grouped in subpopulations…

Physics and Society · Physics 2015-06-12 Halvor Lund , Ludvig Lizana , Ingve Simonsen

Viruses constantly undergo mutations with genomic changes. The propagation of variants of viruses is an interesting problem. We perform numerical simulations of the microscopic epidemic model based on network theory for the spread of…

Populations and Evolution · Quantitative Biology 2025-01-14 Yutaka Okabe , Akira Shudo

Empirical studies suggest that contact patterns follow heterogeneous inter-event times, meaning that intervals of high activity are followed by periods of inactivity. Combined with birth and death of individuals, these temporal constraints…

Physics and Society · Physics 2013-03-25 Luis Enrique Correa Rocha , Vincent D. Blondel

We develop a statistical model for the testing of disease prevalence in a population. The model assumes a binary test result, positive or negative, but allows for biases in sample selection and both type I (false positive) and type II…

Applications · Statistics 2021-12-28 Lucas Böttcher , Maria R. D'Orsogna , Tom Chou

The COVID-19 pandemic is largely caused by airborne transmission, a phenomenon that rapidly gained the attention of the scientific community. Social distancing is of paramount importance to limit the spread of the disease, but to design…

Fluid Dynamics · Physics 2020-12-18 M. E. Rosti , S. Olivieri , M. Cavaiola , A. Seminara , A. Mazzino

We use daily data from Lombardy, the Italian region most affected by the COVID-19 outbreak, to calibrate a SIR model individually on each municipality. These are all covered by the same health system and, in the post-lockdown phase we focus…

Populations and Evolution · Quantitative Biology 2020-04-20 Pietro Battiston , Simona Gamba

Accurate forecasts of COVID-19 is central to resource management and building strategies to deal with the epidemic. We propose a heterogeneous infection rate model with human mobility for epidemic modeling, a preliminary version of which we…

Populations and Evolution · Quantitative Biology 2020-05-06 Ajitesh Srivastava , Viktor K. Prasanna

The role of epidemiological models is crucial for informing public health officials during a public health emergency, such as the COVID-19 pandemic. However, traditional epidemiological models fail to capture the time-varying effects of…

Methodology · Statistics 2022-06-17 Adam Spannaus , Theodore Papamarkou , Samantha Erwin , J. Blair Christian

The rapid worldwide spread of the severe acute respiratory syndrome (SARS) demonstrated the potential threat an infectious disease poses in a closely interconnected and interdependent world. Here we introduce a probabilistic model which…

Disordered Systems and Neural Networks · Physics 2009-11-10 L. Hufnagel , D. Brockmann , T. Geisel

We study numerically how the structures of distinct networks influence the epidemic dynamics in contact process. We first find that the variability difference between homogeneous and heterogeneous networks is very narrow, although the…

Physics and Society · Physics 2012-04-04 Kai Gong , Ming Tang , Hui Yang , Mingsheng Shang

The COVID-19 pandemic has evolved over time through multiple spatial and temporal dynamics. The varying extent of interactions among different geographical areas can result to a complex pattern of spreading so that influences between these…

Physics and Society · Physics 2023-03-15 Troy McMahon , Shlomo Havlin , Lazaros K. Gallos

We present a simple technique to compare the development of the Covid-19 epidemic in different regions, based only on the time series of confirmed cases. Weekly new infections, taken for every day, are interpreted as infection potential of…

Populations and Evolution · Quantitative Biology 2020-06-04 Christoph Bandt

A novel parametric regression model is proposed to fit incidence data typically collected during epidemics. The proposal is motivated by real-time monitoring and short-term forecasting of the main epidemiological indicators within the first…

Masks are used as part of a comprehensive strategy of measures to limit transmission and save lives during the COVID-19 pandemic. Research about the impact of mask-wearing in the COVID-19 pandemic has raised formidable interest across…

Social and Information Networks · Computer Science 2020-11-10 Yurun Tian , Anirudh Sridhar , Osman Yagan , H. Vincent Poor

The phenomenological mathematical model of COVID-19 spreading is proposed for large countries with geographical differentiation of population density. According to the model COVID-19 spreading takes the form of several spatio-temporal waves…

Biological Physics · Physics 2020-12-14 P. S. Grinchuk , S. P. Fisenko

Motivated by the rapid spread of COVID-19 all across the globe, we have performed simulations of a system dynamic epidemic spread model in different possible situations. The simulation, not only captures the model dynamic of the spread of…

Populations and Evolution · Quantitative Biology 2020-04-02 Kashif Zia , Umar Farooq

The spread of infectious diseases, rumors, fashions, innovations are complex contagion processes, embedded both in networked and spatial contexts. Here we investigate the pattern dynamics of a complex contagion, where two agents, say $A$…

Physics and Society · Physics 2019-02-18 Li Chen

In this paper we first introduce the general stochastic epidemic model for the spread of infectious diseases. Then we give methods for inferring model parameters such as the basic reproduction number $R_0$ and vaccination coverage $v_c$…

Methodology · Statistics 2014-11-14 Tom Britton , Federica Giardina
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