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Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has a variable clinical presentation that ranges from asymptomatic, to severe disease with cytokine storm. The mortality rates also differ across the globe, ranging from 0.5-13%.…

How may exposure risks to SARS-CoV-2 be assessed quantitatively? The material metabolism approach of Industrial Ecology can be applied to the mass flows of these virions by their numbers, as a key step in the analysis of the current…

Quantitative Methods · Quantitative Biology 2020-10-30 Gjalt Huppes , Ruben Huele

During the current Covid-19 pandemic in Italy, official data are collected with medical swabs following a pure convenience criterion which, at least in an early phase, has privileged the exam of patients showing evident symptoms. However,…

Quantitative Methods · Quantitative Biology 2020-05-18 Francesca Bassi , Giuseppe Arbia , Pietro Demetrio Falorsi

A novel behavior-epidemiology model, which considers $n$ heterogeneous behavioral groups based on level of risk tolerance and distinguishes behavioral changes by social and disease-related motivations (such as peer-influence and fear of…

Dynamical Systems · Mathematics 2025-01-14 Alice Oveson , Michelle Girvan , Abba Gumel

Moderate to severe post-acute sequelae of SARS-CoV-2 infection (PASC), also called long COVID, is estimated to impact as many as 10% of SARS-CoV-2 infected individuals, representing a chronic condition with a substantial global public…

Methodology · Statistics 2024-10-11 Harrison T. Reeder , Tanayott Thaweethai , Andrea S. Foulkes

To curb the initial spread of SARS-CoV-2, many countries relied on nation-wide implementation of non-pharmaceutical intervention measures, resulting in substantial socio-economic impacts. Potentially, subnational implementations might have…

Physics and Society · Physics 2023-12-19 Mark M. Dekker , Luc E. Coffeng , Frank P. Pijpers , Debabrata Panja , Sake J. de Vlas

An investigation on the correlation between the strong alcoholic drinking and SARS-Cov-2 uninfection rate is carried out. The investigation is done through a simple survey in China based on the social media software Weixin and the survey…

Physics and Society · Physics 2023-02-24 Ning-Hua Tong , Pietro Salvatori

Wastewater data can be very useful for epidemic control during a disease outbreak and proper synthesis of different sources of information can be integrated towards an alerting system, that can be used for decision support. Wastewater data…

A primary quantity of interest in the study of infectious diseases is the average number of new infections that an infected person produces. This so-called reproduction number has significant implications for the disease progression. There…

The dense social contact networks and high mobility in congested urban areas facilitate the rapid transmission of infectious diseases. Typical mechanistic epidemiological models are either based on uniform mixing with ad-hoc contact…

Physics and Society · Physics 2020-09-28 Rohan Patil , Raviraj Dave , Harsh Patel , Viraj M Shah , Deep Chakrabarti , Udit Bhatia

To support the ongoing management of viral respiratory diseases, many countries are moving towards an integrated model of surveillance for SARS-CoV-2, influenza, and other respiratory pathogens. While many surveillance approaches catalysed…

The coronavirus disease (COVID-19), caused by the SARS-CoV-2 virus, was declared a pandemic by the World Health Organization (WHO) in February 2020. Currently, there are no vaccines or treatments that have been approved after clinical…

Computers and Society · Computer Science 2020-04-30 Vukosi Marivate , Herkulaas MvE Combrink

We present results on the infection risk from SARS-CoV-2 under different scenarios based on measured particle size-dependent mask penetration, measured total inward leakage, measured human aerosol emission for sizes from 10nm to 1mm, and…

Background School closures and distance learning have been extensively applied to control SARS-CoV-2 transmission. Despite evidence of viral circulation in schools, the contribution of students and of in-person schooling to the transmission…

The COVID-19 pandemic, caused by the coronavirus SARS-CoV-2, has led to a wide range of non-pharmaceutical interventions being implemented around the world to curb transmission. However, the economic and social costs of some of these…

Quantitative Methods · Quantitative Biology 2022-04-29 Cameron A. Smith , Christian A. Yates , Ben Ashby

An accurate multiclass classification strategy is crucial to interpreting antibody tests. However, traditional methods based on confidence intervals or receiver operating characteristics lack clear extensions to settings with more than two…

Quantitative Methods · Quantitative Biology 2024-05-07 Rayanne A. Luke , Anthony J. Kearsley , Paul N. Patrone

In this work, we address the connection between population density centers in urban areas, and the nature of human flows between such centers, in shaping the vulnerability to the onset of contagious diseases. A study of 163 cities, chosen…

Physics and Society · Physics 2021-02-02 Surendra Hazarie , David Soriano-Paños , Alex Arenas , Jesús Gómez-Gardeñes , Gourab Ghoshal

Contact tracing has been extensively studied from different perspectives in recent years. However, there is no clear indication of why this intervention has proven effective in some epidemics (SARS) and mostly ineffective in some others…

Social and Information Networks · Computer Science 2021-03-01 Quyu Kong , Manuel Garcia-Herranz , Ivan Dotu , Manuel Cebrian

Understanding the impact of different social interactions is key to improving epidemic models. Here, we use extensive registry data -- including PCR test results and population-level networks -- to investigate the impact of school, family,…

Social and Information Networks · Computer Science 2025-01-08 Javier Garcia-Bernardo , Christine Hedde-von Westernhagen , Tom Emery , Albert Jan van Hoek

Several important aspects related to SARS-CoV-2 transmission are not well known due to a lack of appropriate data. However, mathematical and computational tools can be used to extract part of this information from the available data, like…

Populations and Evolution · Quantitative Biology 2022-04-01 Nicolas Franco , Pietro Coletti , Lander Willem , Leonardo Angeli , Adrien Lajot , Steven Abrams , Philippe Beutels , Christel Faes , Niel Hens