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Named-entity recognition (NER) is a task that typically requires large annotated datasets, which limits its applicability across domains with varying entity definitions. This paper addresses few-shot NER, aiming to transfer knowledge to new…

Computation and Language · Computer Science 2024-12-13 Ayoub Hammal , Benno Uthayasooriyar , Caio Corro

Cryo-electron microscopy (cryo-EM) remains pivotal in structural biology, yet the task of protein particle picking, integral for 3D protein structure construction, is laden with manual inefficiencies. While recent AI tools such as Topaz and…

Computer Vision and Pattern Recognition · Computer Science 2023-11-29 Fei He , Zhiyuan Yang , Mingyue Gao , Biplab Poudel , Newgin Sam Ebin Sam Dhas , Rajan Gyawali , Ashwin Dhakal , Jianlin Cheng , Dong Xu

It has been shown that traditional deep learning methods for electronic microscopy segmentation usually suffer from low transferability when samples and annotations are limited, while large-scale vision foundation models are more robust…

Image and Video Processing · Electrical Eng. & Systems 2024-03-14 Yiran Wang , Li Xiao

Under the domain shift, cross-domain few-shot object detection aims to adapt object detectors in the target domain with a few annotated target data. There exists two significant challenges: (1) Highly insufficient target domain data; (2)…

Computer Vision and Pattern Recognition · Computer Science 2022-09-23 Yipeng Gao , Lingxiao Yang , Yunmu Huang , Song Xie , Shiyong Li , Wei-shi Zheng

Few-shot classification aims to recognize unseen classes with few labeled samples from each class. Many meta-learning models for few-shot classification elaborately design various task-shared inductive bias (meta-knowledge) to solve such…

Computer Vision and Pattern Recognition · Computer Science 2021-05-04 Haoqing Wang , Zhi-Hong Deng

Cryo-electron tomography (cryo-ET) is an emerging technology for the 3D visualization of structural organizations and interactions of subcellular components at near-native state and sub-molecular resolution. Tomograms captured by cryo-ET…

Quantitative Methods · Quantitative Biology 2020-11-02 Xiangrui Zeng , Min Xu

Automatic cell segmentation in microscopy images works well with the support of deep neural networks trained with full supervision. Collecting and annotating images, though, is not a sustainable solution for every new microscopy database…

Computer Vision and Pattern Recognition · Computer Science 2020-07-06 Youssef Dawoud , Julia Hornauer , Gustavo Carneiro , Vasileios Belagiannis

Despite advances with deep learning (DL), automated airway segmentation from chest CT scans continues to face challenges in segmentation quality and generalization across cohorts. To address these, we propose integrating Curriculum Learning…

Computer Vision and Pattern Recognition · Computer Science 2024-11-11 Maxime Jacovella , Ali Keshavarzi , Elsa Angelini

Few-shot learning aims to recognize novel queries with limited support samples by learning from base knowledge. Recent progress in this setting assumes that the base knowledge and novel query samples are distributed in the same domains,…

Computer Vision and Pattern Recognition · Computer Science 2023-06-21 Yifan Zhao , Tong Zhang , Jia Li , Yonghong Tian

In this paper, we look at the problem of cross-domain few-shot classification that aims to learn a classifier from previously unseen classes and domains with few labeled samples. Recent approaches broadly solve this problem by…

Computer Vision and Pattern Recognition · Computer Science 2022-05-05 Wei-Hong Li , Xialei Liu , Hakan Bilen

Cellular processes are governed by macromolecular complexes inside the cell. Study of the native structures of macromolecular complexes has been extremely difficult due to lack of data. With recent breakthroughs in Cellular electron cryo…

Quantitative Methods · Quantitative Biology 2018-06-12 Chengqian Che , Ruogu Lin , Xiangrui Zeng , Karim Elmaaroufi , John Galeotti , Min Xu

The domain shift between the source and target domain is the main challenge in Cross-Domain Few-Shot Learning (CD-FSL). However, the target domain is absolutely unknown during the training on the source domain, which results in lacking…

Computer Vision and Pattern Recognition · Computer Science 2021-09-06 Xiyao Liu , Zhong Ji , Yanwei Pang , Zhongfei Zhang

This work provides a framework for addressing the problem of supervised domain adaptation with deep models. The main idea is to exploit adversarial learning to learn an embedded subspace that simultaneously maximizes the confusion between…

Computer Vision and Pattern Recognition · Computer Science 2017-11-08 Saeid Motiian , Quinn Jones , Seyed Mehdi Iranmanesh , Gianfranco Doretto

Cryo-Electron Tomography (cryo-ET) is a new 3D imaging technique with unprecedented potential for resolving submicron structural detail. Existing volume visualization methods, however, cannot cope with its very low signal-to-noise ratio. In…

Quantitative Methods · Quantitative Biology 2026-03-27 Ngan Nguyen , Ciril Bohak , Dominik Engel , Peter Mindek , Ondřej Strnad , Peter Wonka , Sai Li , Timo Ropinski , Ivan Viola

Cross-domain few-shot classification induces a much more challenging problem than its in-domain counterpart due to the existence of domain shifts between the training and test tasks. In this paper, we develop a novel Adaptive Parametric…

Computer Vision and Pattern Recognition · Computer Science 2023-09-06 Marzi Heidari , Abdullah Alchihabi , Qing En , Yuhong Guo

Cryo-electron tomography (cryo-ET) provides a unique window into molecular organization in cellular environments (in situ). However, the interpretation of molecular structural information is complicated by several intrinsic properties of…

Biomolecules · Quantitative Biology 2026-02-17 Slavica Jonic

Electron Cryo-Tomography (ECT) enables 3D visualization of macromolecule structure inside single cells. Macromolecule classification approaches based on convolutional neural networks (CNN) were developed to separate millions of…

Quantitative Methods · Quantitative Biology 2018-03-28 Jialiang Guo , Bo Zhou , Xiangrui Zeng , Zachary Freyberg , Min Xu

Microscopy data collections are becoming larger and more frequent. Accurate and precise quantitative analysis tools like cell instance segmentation are necessary to benefit from them. This is challenging due to the variability in the data,…

Computer Vision and Pattern Recognition · Computer Science 2024-02-28 Ram J. Zaveri , Voke Brume , Gianfranco Doretto

Most approaches in few-shot learning rely on costly annotated data related to the goal task domain during (pre-)training. Recently, unsupervised meta-learning methods have exchanged the annotation requirement for a reduction in few-shot…

Machine Learning · Computer Science 2020-06-23 Carlos Medina , Arnout Devos , Matthias Grossglauser

Few-shot classification aims to learn a classifier to recognize unseen classes during training with limited labeled examples. While significant progress has been made, the growing complexity of network designs, meta-learning algorithms, and…

Computer Vision and Pattern Recognition · Computer Science 2020-01-14 Wei-Yu Chen , Yen-Cheng Liu , Zsolt Kira , Yu-Chiang Frank Wang , Jia-Bin Huang