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We perform molecular dynamic (MD) simulations of frictional non-thermal particles driven by an externally applied shear stress. After the system jams following a transient flow, we probe its mechanical response in order to clarify whether…

Soft Condensed Matter · Physics 2012-02-09 Raffaele Pastore , Massimo Pica Ciamarra , Antonio Coniglio

Mechanical forces influence the dynamics of growing tissues. Computer simulations are employed to study the importance of interfacial effects in tissue competition. It was speculated that mechanical pressure determines the competition,…

Biological Physics · Physics 2024-06-03 Nirmalendu Ganai , Tobias Buscher , Gerhard Gompper , Jens Elgeti

Amorphous packings of spheres have been intensely investigated in order to understand the mechanical and flow behaviour of dense granular matter, and to explore universal aspects of the transition from fluid to structurally arrested or…

Soft Condensed Matter · Physics 2016-06-22 H. A. Vinutha , Srikanth Sastry

In order to understand the nature of friction in closely-packed granular materials, a discrete element simulation on granular layers subjected to isobaric plain shear is performed. It is found that the friction coefficient increases as the…

Soft Condensed Matter · Physics 2007-06-15 Takahiro Hatano

We consider the shear rheology of concentrated suspensions of non-Brownian frictional particles. The key result of our study is the emergence of a pronounced shear-thickening regime, where frictionless particles would normally undergo…

Soft Condensed Matter · Physics 2013-11-27 Claus Heussinger

We model the progressive maturation of a heterogeneous mass towards a gravity-driven instability, characterized by the competition between frictional sliding and tension cracking, using array of slider blocks on an inclined basal surface,…

Geophysics · Physics 2015-05-13 Jerome Faillettaz , Didier Sornette , Martin Funk

We study the response to shear of a one-dimensional monolayer embedded between two rigid plates, where the upper one is externally driven. The shear is shown to excite ``shearons'', which are collective modes of the embedded system with…

Statistical Mechanics · Physics 2007-05-23 Markus Porto , Michael Urbakh , Joseph Klafter

We investigate the effective friction encountered by a mass sliding on a granular layer as a function of bed thickness and boundary roughness conditions. The observed friction has minima for a small number of layers before it increases and…

Soft Condensed Matter · Physics 2009-11-11 Saloome Siavoshi , Ashish V. Orpe , Arshad Kudrolli

We have studied the entropy-driven mechanism leading to stationary patterns formation in stochastic systems with local dynamics and non-Fickian diffusion. We have shown that a multiplicative noise fulfilling a fluctuation-dissipation…

Statistical Mechanics · Physics 2008-06-20 D. O. Kharchenko , S. V. Kokhan , A. V. Dvornichenko

Mechanical characteristics of single biological cells are used to identify and possibly leverage interesting differences among cells or cell populations. Fluidity---hysteresivity normalized to the extremes of an elastic solid or a viscous…

Cell Behavior · Quantitative Biology 2013-10-22 John M. Maloney , Eric Lehnhardt , Alexandra F. Long , Krystyn J. Van Vliet

Granular matter is comprised of a large number of particles whose collective behavior determines macroscopic properties such as flow and mechanical strength. A comprehensive theory of the properties of granular matter, therefore, requires a…

Statistical Mechanics · Physics 2009-11-13 Silke Henkes , Corey S. O'Hern , Bulbul Chakraborty

The maximum entropy production (MEP) principle is a hypothetical law of physics which dictates that complex systems, far from equilibrium, evolve into an ordered dissipative structure (DS) which generates as much entropy per second as…

Statistical Mechanics · Physics 2026-05-28 Albert Han , Jiri Kataman-Kustwan , Alexey Bezryadin

The elastic response is studied of a single flexible chain grafted on a rigid plane and an ensemble of non-interacting tethered chains. It is demonstrated that the entropic theory of rubber elasticity leads to conclusions that disagree with…

Statistical Mechanics · Physics 2007-05-23 A. D. Drozdov

Preserving biodiversity and ecosystem stability is a challenge that can be pursued through modern statistical mechanics modeling. Here we introduce a variational maximum entropy-based algorithm to evaluate the entropy in a minimal ecosystem…

Biological Physics · Physics 2018-10-17 Mattia Miotto , Lorenzo Monacelli

We perform a novel analysis of the granular texture of a granular bed close to stability limit. Our analysis is based on a unique criterion of friction mobilisation in a simulated two-dimensional packing. In this way, we recover the bimodal…

Soft Condensed Matter · Physics 2009-11-11 Lydie Staron , Farhang Radjai

We study the dynamical behavior of a single degree of freedom mechanical system with a particle damper. The particle (granular) damping was optimized for the primary system operating condition by using an appropriate gap size for a…

Soft Condensed Matter · Physics 2013-02-19 Martín Sánchez , C. Manuel Carlevaro

One of the most interesting phenomena in the soft-matter realm consists in the spontaneous formation of super-molecular structures (microphases) in condition of thermodynamic equilibrium. A simple mechanism responsible for this…

Soft Condensed Matter · Physics 2017-08-23 A. Imperio , D. Pini , L. Reatto

Stochastic fluctuations of molecular abundances are a ubiquitous feature of cellular processes and lead to significant cell-to-cell variability. Recent theoretical work established lower bounds for stochastic fluctuations in cells for broad…

Molecular Networks · Quantitative Biology 2025-05-06 Brayden Kell , Andreas Hilfinger

The evolution of the internal granular structure in shear-arrested and shear-flowing states of granular materials is characterized using fabric tensors as descriptors of the internal contact and force networks. When a dilute system of…

Soft Condensed Matter · Physics 2020-05-20 Ishan Srivastava , Jeremy B. Lechman , Gary S. Grest , Leonardo E. Silbert

Many cellular components are present in such low numbers that individual stochastic production and degradation events lead to significant fluctuations in molecular abundances. Although feedback control can, in principle, suppress such…

Molecular Networks · Quantitative Biology 2025-12-25 Ryan Ripsman , Brayden Kell , Andreas Hilfinger