Related papers: Update Query Time Trade-off for dynamic Suffix Arr…
The task of calculating similarities between strings held by different organizations without revealing these strings is an increasingly important problem in areas such as health informatics, national censuses, genomics, and fraud detection.…
How can one quickly answer the most and top popular objects at any time, given a large log stream in a system of billions of users? It is equivalent to find the mode and top-frequent elements in a dynamic array corresponding to the log…
We present an improved wavelet tree construction algorithm and discuss its applications to a number of rank/select problems for integer keys and strings. Given a string of length n over an alphabet of size $\sigma\leq n$, our method builds…
In this paper we consider the following modification of the iterative search problem. We are given a tree $T$, so that a dynamic catalog $C(v)$ is associated with every tree node $v$. For any $x$ and for any node-to-root path $\pi$ in $T$,…
In this paper, we construct a data structure to efficiently compute the longest increasing subsequence of a sequence subject to dynamic updates. Our data structure supports a query for the longest increasing subsequence in $O(r+\log n)$…
The directed acyclic word graph (DAWG) of a string $y$ of length $n$ is the smallest (partial) DFA which recognizes all suffixes of $y$ with only $O(n)$ nodes and edges. In this paper, we show how to construct the DAWG for the input string…
We present two algorithms for dynamically maintaining a spanning forest of a graph undergoing edge insertions and deletions. Our algorithms guarantee {\em worst-case update time} and work against an adaptive adversary, meaning that an edge…
The net frequency (NF) of a string, of length $m$, in a text, of length $n$, is the number of occurrences of the string in the text with unique left and right extensions. Recently, Guo et al. [CPM 2024] showed that NF is combinatorially…
Based on the Breslauer-Italiano online suffix tree construction algorithm (2013) with double logarithmic worst-case guarantees on the update time per letter, we develop near-real-time algorithms for several classical problems on strings,…
$V$-order is a global order on strings related to Unique Maximal Factorization Families (UMFFs), which are themselves generalizations of Lyndon words. $V$-order has recently been proposed as an alternative to lexicographical order in the…
In this work, we study the limits of compressed data structures, i.e., structures that support various queries on an input text $T\in\Sigma^n$ using space proportional to the size of $T$ in compressed form. Nearly all fundamental queries…
The tremendous expanse of search engines, dictionary and thesaurus storage, and other text mining applications, combined with the popularity of readily available scanning devices and optical character recognition tools, has necessitated…
We study dynamic algorithms for the longest increasing subsequence (\textsf{LIS}) problem. A dynamic \textsf{LIS} algorithm maintains a sequence subject to operations of the following form arriving one by one: (i) insert an element, (ii)…
We study the selection problem, namely that of computing the $i$th order statistic of $n$ given elements. Here we offer a data structure called \emph{selectable sloppy heap} handling a dynamic version in which upon request: (i)~a new…
We consider the problem of representing, in a compressed format, a bit-vector $S$ of $m$ bits with $n$ 1s, supporting the following operations, where $b \in \{0, 1 \}$: $rank_b(S,i)$ returns the number of occurrences of bit $b$ in the…
We study the problem of evaluating a Monadic Second Order (MSO) query over strings under updates in the setting of direct access. We present an algorithm that, given an MSO query with first-order free variables represented by an unambiguous…
Many algorithms use data structures that maintain properties of matrices undergoing some changes. The applications are wide-ranging and include for example matchings, shortest paths, linear programming, semi-definite programming, convex…
An order-preserving square in a string is a fragment of the form $uv$ where $u\neq v$ and $u$ is order-isomorphic to $v$. We show that a string $w$ of length $n$ over an alphabet of size $\sigma$ contains $\mathcal{O}(\sigma n)$…
Many succinct data structures on the word RAM require precomputed tables to start operating. Usually, the tables can be constructed in sublinear time. In this time, most of a data structure is not initialized, i.e., there is plenty of…
In Gapped String Indexing, the goal is to compactly represent a string $S$ of length $n$ such that for any query consisting of two strings $P_1$ and $P_2$, called patterns, and an integer interval $[\alpha, \beta]$, called gap range, we can…