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We propose an epidemic model SIPHERD in which three categories of infection carriers Symptomatic, Purely Asymptomatic, and Exposed are considered with different rates of transmission of infection that are taken dependent on the lockdown and…

Populations and Evolution · Quantitative Biology 2020-08-26 Ashutosh Mahajan , Ravi Solanki , A. S. Namitha

We model and calculate the fraction of infected population necessary to reach herd immunity, taking into account the heterogeneity in infectiousness and susceptibility, as well as the correlation between those two parameters. We show that…

Populations and Evolution · Quantitative Biology 2021-01-19 Yaron Oz , Ittai Rubinstein , Muli Safra

In this work, we aim to understand the influence of the heterogeneity of infection rates on the Susceptible-Infected-Susceptible (SIS) epidemic spreading. Employing the classic SIS model as the benchmark, we study the influence of the…

Physics and Society · Physics 2016-04-06 Bo Qu , Huijuan Wang

Modeling human behavior is essential to accurately predict epidemic spread, with behaviors like vaccine hesitancy complicating control efforts. While epidemic spread is often treated as a simple contagion, vaccine uptake may follow complex…

Physics and Society · Physics 2024-12-17 Alfonso de Miguel-Arribas , Alberto Aleta , Yamir Moreno

Countries highly exposed to incoming traffic from China were expected to be at the highest risk of COVID-19 spread. However, COVID-19 case numbers (infection levels) are negatively correlated with incoming traffic-level. Moreover, infection…

Populations and Evolution · Quantitative Biology 2020-07-15 Hagai B. Perets , Ruth Perets

Motivated by the increasing number of COVID-19 cases that have been observed in many countries after the vaccination and relaxation of non-pharmaceutical interventions, we propose a mathematical model on time-varying networks for the spread…

Dynamical Systems · Mathematics 2022-03-09 Kathinka Frieswijk , Lorenzo Zino , Ming Cao

The spread of COVID-19 revealed that transmission risk patterns are not homogenous across different cities and communities, and various heterogeneous features can influence the spread trajectories. Hence, for predictive pandemic monitoring,…

Machine Learning · Computer Science 2022-09-22 Junwei Ma , Bo Li , Qingchun Li , Chao Fan , Ali Mostafavi

One clear aspect of behaviour in the COVID-19 pandemic has been people's focus on, and response to, reported or observed infection numbers in their community. We describe a simple model of infectious disease spread in a pandemic situation…

Populations and Evolution · Quantitative Biology 2022-02-24 Fintan Costello , Paul Watts , Rita Howe

The COVID-19 pandemic started in Wuhan, China, and caused the worldwide spread of the RNA virus SARS-CoV-2, the causative agent of COVID-19. Because of its mutational rate, wide geographical distribution, and host response variance this…

Populations and Evolution · Quantitative Biology 2021-12-23 Taima N. Furuyama , Fernando Antoneli , Isabel M. V. G. Carvalho , Marcelo R. S. Briones , Luiz M. R. Janini

This paper extends the canonical model of epidemiology, SIRD model, to allow for time varying parameters for real-time measurement of the stance of the COVID-19 pandemic. Time variation in model parameters is captured using the generalized…

Populations and Evolution · Quantitative Biology 2021-02-11 Cem Cakmakli , Yasin Simsek

In this work, we discuss the SIR epidemiological model and different variations of it applied to the propagation of the COVID-19 pandemia; we employ the data of the state of Guanajuato and of Mexico. We present some considerations that can…

Populations and Evolution · Quantitative Biology 2022-11-16 Nana Cabo Bizet , Jonanthan Hidalgo Núñez , Gil Estefano Rodrígez Rivera

COVID-19 is not a universal killer. We study the spread of COVID-19 at the county level for the United States up until the 15$^{th}$ of August, 2020. We show that the prevalence of the disease and the death rate are correlated with the…

Populations and Evolution · Quantitative Biology 2021-07-01 Ayan Paul , Philipp Englert , Melinda Varga

There are many sources of data giving information about the number of SARS-CoV-2 infections in the population, but all have major drawbacks, including biases and delayed reporting. For example, the number of confirmed cases largely…

Applications · Statistics 2022-06-08 Nicholas J. Irons , Adrian E. Raftery

How may exposure risks to SARS-CoV-2 be assessed quantitatively? The material metabolism approach of Industrial Ecology can be applied to the mass flows of these virions by their numbers, as a key step in the analysis of the current…

Quantitative Methods · Quantitative Biology 2020-10-30 Gjalt Huppes , Ruben Huele

The COVID-19 pandemic has significantly challenged traditional epidemiological models due to factors such as delayed diagnosis, asymptomatic transmission, isolation-induced contact changes, and underreported mortality. In response to these…

Applications · Statistics 2025-03-10 Wenchen Liu , Chang Liu , Dehui Wang , Yiyuan She

COVID-19 has resulted in a public health global crisis. The pandemic control necessitates epidemic models that capture the trends and impacts on infectious individuals. Many exciting models can implement this but they lack practical…

Computers and Society · Computer Science 2021-04-13 Ou Deng , Kiichi Tago , Qun Jin

The COVID-19 pandemic has spurred a large amount of observational studies reporting linkages between the risk of developing severe COVID-19 or dying from it, and sex and gender. By reviewing a large body of related literature and conducting…

It is well recognized that population heterogeneity plays an important role in the spread of epidemics. While individual variations in social activity are often assumed to be persistent, i.e. constant in time, here we discuss the…

Populations and Evolution · Quantitative Biology 2021-02-22 Alexei V. Tkachenko , Sergei Maslov , Tong Wang , Ahmed Elbanna , George N. Wong , Nigel Goldenfeld

This work aims to assess the risks of Covid-19 disease spread in diverse daily-life situations (referred to as scenarios) involving crowds of maskless pedestrians, mostly outdoors. More concretely, we develop a method to infer the global…

Physics and Society · Physics 2021-11-04 Willy Garcia , Simon Mendez , Baptiste Fray , Alexandre Nicolas

The COVID-19 pandemic has led to a vast amount of growth for statistical models and methods which characterize features of disease outbreaks. One class of models that came to light in this regard has been the use of self-exciting point…

Applications · Statistics 2022-04-29 Peter Boyd , James Molyneux
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