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Transition Path Theory (TPT) provides a rigorous statistical characterization of the ensemble of trajectories connecting directly, i.e., without detours, two disconnected (sets of) states in a Markov chain, a stochastic process that…

Statistical Mechanics · Physics 2023-06-28 G. Bonner , F. J. Beron-Vera , M. J. Olascoaga

Many problems of practical interest rely on Continuous-time Markov chains~(CTMCs) defined over combinatorial state spaces, rendering the computation of transition probabilities, and hence probabilistic inference, difficult or impossible…

Graph Neural Networks have demonstrated great success in various fields of multimedia. However, the distribution shift between the training and test data challenges the effectiveness of GNNs. To mitigate this challenge, Test-Time Training…

Machine Learning · Computer Science 2024-04-23 Jiaxin Zhang , Yiqi Wang , Xihong Yang , Siwei Wang , Yu Feng , Yu Shi , Ruicaho Ren , En Zhu , Xinwang Liu

Computing the stationary distributions of a continuous-time Markov chain (CTMC) involves solving a set of linear equations. In most cases of interest, the number of equations is infinite or too large, and the equations cannot be solved…

Probability · Mathematics 2020-08-25 Juan Kuntz , Philipp Thomas , Guy-Bart Stan , Mauricio Barahona

This paper contributes an in-depth study of properties of continuous time Markov chains (CTMCs) on non-negative integer lattices $\N_0^d$, with particular interest in one-dimensional CTMCs with polynomial transitions rates. Such stochastic…

Probability · Mathematics 2020-06-22 Chuang Xu , Mads Christian Hansen , Carsten Wiuf

This paper surveys various results about Markov chains on general (non-countable) state spaces. It begins with an introduction to Markov chain Monte Carlo (MCMC) algorithms, which provide the motivation and context for the theory which…

Probability · Mathematics 2009-09-29 Gareth O. Roberts , Jeffrey S. Rosenthal

We introduce a novel training principle for probabilistic models that is an alternative to maximum likelihood. The proposed Generative Stochastic Networks (GSN) framework is based on learning the transition operator of a Markov chain whose…

Machine Learning · Computer Science 2015-03-29 Guillaume Alain , Yoshua Bengio , Li Yao , Jason Yosinski , Eric Thibodeau-Laufer , Saizheng Zhang , Pascal Vincent

Non-linear state space models are a widely-used class of models for biological, economic, and physical processes. Fitting these models to observed data is a difficult inference problem that has no straightforward solution. We take a…

Computation · Statistics 2013-05-03 Alexander Y. Shestopaloff , Radford M. Neal

Masked language models (MLMs) define local conditional distributions over tokens but do not, in general, correspond to any consistent joint distribution over sequences. This raises a fundamental question: what global distributional behavior…

Machine Learning · Computer Science 2026-05-19 Suvadip Sana , Sami Wolf , Neer Mehta , Alina Shah , Aitzaz Shaikh , Janna Goodman , Lionel Levine

A continuous-time Markov chain (CTMC) execution is a continuous class of probability distributions over states. This paper proposes a probabilistic linear-time temporal logic, namely continuous-time linear logic (CLL), to reason about the…

Logic in Computer Science · Computer Science 2022-04-15 Ji Guan , Nengkun Yu

Time-series data augmentation plays a crucial role in regression-oriented forecasting tasks, where limited data restricts the performance of deep learning models. While Generative Adversarial Networks (GANs) have shown promise in synthetic…

Machine Learning · Computer Science 2026-05-01 Ci Lin , Futong Li , Tet Yeap , Iluju Kiringa

Current state-of-the-art systems for sequence labeling are typically based on the family of Recurrent Neural Networks (RNNs). However, the shallow connections between consecutive hidden states of RNNs and insufficient modeling of global…

Computation and Language · Computer Science 2019-06-07 Yijin Liu , Fandong Meng , Jinchao Zhang , Jinan Xu , Yufeng Chen , Jie Zhou

The emerging paradigm of leveraging pretrained large language models (LLMs) for time series forecasting has predominantly employed linguistic-temporal modality alignment strategies through token-level or layer-wise feature mapping. However,…

Artificial Intelligence · Computer Science 2025-05-20 Siming Sun , Kai Zhang , Xuejun Jiang , Wenchao Meng , Qinmin Yang

We propose and analyze a model-based bootstrap for transition kernels in finite controlled Markov chains (CMCs) with possibly nonstationary or history-dependent control policies, a setting that arises naturally in offline reinforcement…

Machine Learning · Statistics 2026-05-13 Ziwei Su , Imon Banerjee , Diego Klabjan

We introduce a framework for analyzing ordinary differential equation (ODE) models of biological networks using statistical model checking (SMC). A key aspect of our work is the modeling of single-cell variability by assigning a probability…

Quantitative Methods · Quantitative Biology 2018-12-05 Bing Liu , Benjamin M. Gyori , P. S. Thiagarajan

Generalized linear models (GLMs) arise in high-dimensional machine learning, statistics, communications and signal processing. In this paper we analyze GLMs when the data matrix is random, as relevant in problems such as compressed sensing,…

Information Theory · Computer Science 2019-04-01 Jean Barbier , Florent Krzakala , Nicolas Macris , Léo Miolane , Lenka Zdeborová

In this work, we establish a direct connection between generative diffusion models (DMs) and stochastic quantization (SQ). The DM is realized by approximating the reversal of a stochastic process dictated by the Langevin equation,…

High Energy Physics - Lattice · Physics 2024-05-10 Lingxiao Wang , Gert Aarts , Kai Zhou

We present GenEFT: an effective theory framework for shedding light on the statics and dynamics of neural network generalization, and illustrate it with graph learning examples. We first investigate the generalization phase transition as…

Machine Learning · Computer Science 2025-03-21 David D. Baek , Ziming Liu , Max Tegmark

Discrete flow models offer a powerful framework for learning distributions over discrete state spaces and have demonstrated superior performance compared to the discrete diffusion models. However, their convergence properties and error…

Statistics Theory · Mathematics 2026-05-27 Zhengyan Wan , Yidong Ouyang , Qiang Yao , Liyan Xie , Fang Fang , Hongyuan Zha , Guang Cheng

Combining cross-section and time series data is a long and well established practice in empirical economics. We develop a central limit theory that explicitly accounts for possible dependence between the two data sets. We focus on common…

Methodology · Statistics 2022-09-20 Jinyong Hahn , Guido Kuersteiner , Maurizio Mazzocco