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The freud Python package is a powerful library for analyzing simulation data. Written with modern simulation and data analysis workflows in mind, freud provides a Python interface to fast, parallelized C++ routines that run efficiently on…

Nowadays interactive digital scientific environments have become an integral part of scientific computing in solving various scientific tasks in research, but also STEM education. We introduce SageMath or shortly Sage -- a free open…

Physics Education · Physics 2025-06-23 Dominik Borovský , Jozef Hanč , Martina Hančová

In the era of gravitational-wave astronomy, general-relativistic simulations of compact objects play a role of paramount importance. These calculations can be performed with the Einstein Toolkit, an open-source and community-supported…

General Relativity and Quantum Cosmology · Physics 2021-04-20 Gabriele Bozzola

Software and Computing (S&C) are essential to all High Energy Physics (HEP) experiments and many theoretical studies. The size and complexity of S&C are now commensurate with that of experimental instruments, playing a critical role in…

Mining data streams is a challenge per se. It must be ready to deal with an enormous amount of data and with problems not present in batch machine learning, such as concept drift. Therefore, applying a batch-designed technique, such as…

Machine Learning · Computer Science 2020-08-21 Lucca Portes Cavalheiro , Jean Paul Barddal , Alceu de Souza Britto , Laurent Heutte

We describe the plans and objectives of the CEDAR project (Combined e-Science Data Analysis Resource for High Energy Physics) newly funded by the PPARC e-Science programme in the UK. CEDAR will combine the strengths of the well established…

High Energy Physics - Phenomenology · Physics 2007-05-23 J. M. Butterworth , S. Butterworth , B. M. Waugh , W. J. Stirling , M. R. Whalley

HEP data-processing software must support the disparate physics needs of many experiments. For both collider and neutrino environments, HEP experiments typically use data-processing frameworks to manage the computational complexities of…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-29 Christopher D. Jones , Kyle Knoepfel , Paolo Calafiura , Charles Leggett , Vakhtang Tsulaia

We present Paicos, a new object-oriented Python package for analyzing simulations performed with Arepo. Paicos strives to reduce the learning curve for students and researchers getting started with Arepo simulations. As such, Paicos…

Instrumentation and Methods for Astrophysics · Physics 2024-04-24 Thomas Berlok , Léna Jlassi , Ewald Puchwein , Troels Haugbølle

The High Energy Phyiscs community has developed and needs to maintain many tens of millions of lines of code and to integrate effectively the work of thousands of developers across large collaborations. Software needs to be built,…

Scientific foundation models hold great promise for advancing nuclear and particle physics by improving analysis precision and accelerating discovery. Yet, progress in this field is often limited by the lack of openly available large scale…

Data Analysis, Statistics and Probability · Physics 2025-09-09 Shuhang Li , Yi Huang , David Park , Xihaier Luo , Haiwang Yu , Yeonju Go , Christopher Pinkenburg , Yuewei Lin , Shinjae Yoo , Joseph Osborn , Christof Roland , Jin Huang , Yihui Ren

Large High Energy Physics (HEP) experiments adopted a distributed computing model more than a decade ago. WLCG, the global computing infrastructure for LHC, in partnership with the US Open Science Grid, has achieved data management at the…

We present nbodykit, an open-source, massively parallel Python toolkit for analyzing large-scale structure (LSS) data. Using Python bindings of the Message Passing Interface (MPI), we provide parallel implementations of many commonly used…

Instrumentation and Methods for Astrophysics · Physics 2018-10-31 Nick Hand , Yu Feng , Florian Beutler , Yin Li , Chirag Modi , Uros Seljak , Zachary Slepian

Studying facial expressions is a notoriously difficult endeavor. Recent advances in the field of affective computing have yielded impressive progress in automatically detecting facial expressions from pictures and videos. However, much of…

Computer Vision and Pattern Recognition · Computer Science 2023-03-09 Jin Hyun Cheong , Eshin Jolly , Tiankang Xie , Sophie Byrne , Matthew Kenney , Luke J. Chang

Exploratory data analysis tools must respond quickly to a user's questions, so that the answer to one question (e.g. a visualized histogram or fit) can influence the next. In some SQL-based query systems used in industry, even very large…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-11-09 Jim Pivarski , David Lange , Thanat Jatuphattharachat

ScopeSim is a flexible multipurpose instrument data simulation framework built in Python. It enables both raw and reduced observation data to be simulated for a wide range of telescopes and instruments quickly and efficiently on a personal…

Instrumentation and Methods for Astrophysics · Physics 2021-09-29 Kieran Leschinski , Hugo Buddelmeijer , Oliver Czoske , Miguel Verdugo , Gijs Verdoes-Kleijn , Werner Zeilinger

HEP-Frame is a new C++ package designed to efficiently perform analyses of data sets from a very large number of events, like those available at the Large Hadron Collider (LHC) at CERN, Geneva. It mainly targets high performance servers and…

High Energy Physics - Experiment · Physics 2023-03-10 A. Pereira , A. Onofre , A. Proenca

This paper describes PyOED, a highly extensible scientific package that enables developing and testing model-constrained optimal experimental design (OED) for inverse problems. Specifically, PyOED aims to be a comprehensive Python toolkit…

Mathematical Software · Computer Science 2023-12-20 Abhijit Chowdhary , Shady E. Ahmed , Ahmed Attia

scida is a Python package for reading and analyzing large scientific data sets with support for various cosmological and galaxy formation simulations out-of-the-box. Data access is provided through a hierarchical dictionary-like data…

Instrumentation and Methods for Astrophysics · Physics 2024-02-29 Chris Byrohl , Dylan Nelson

Today's world of scientific software for High Energy Physics (HEP) is powered by x86 code, while the future will be much more reliant on accelerators like GPUs and FPGAs. The portable parallelization strategies (PPS) project of the High…

One overarching objective of science is to further our understanding of the universe, from its early stages to its current state and future evolution. This depends on gaining insight on the universe's most macroscopic components, for…

High Energy Physics - Phenomenology · Physics 2020-01-01 Caterina Doglioni