scida is a Python package for reading and analyzing large scientific data sets with support for various cosmological and galaxy formation simulations out-of-the-box. Data access is provided through a hierarchical dictionary-like data structure after a simple load() function. Using the dask library for scalable, parallel and out-of-core computation, all computation requests from a user session are first collected in a task graph. Arbitrary custom analysis, as well as all available dask (array) operations, can be performed. The subsequent computation is executed only upon request, on a target resource (e.g. a HPC cluster).
@article{arxiv.2402.17818,
title = {scida: scalable analysis for scientific big data},
author = {Chris Byrohl and Dylan Nelson},
journal= {arXiv preprint arXiv:2402.17818},
year = {2024}
}
Comments
recommended for acceptance in the Journal of Open Source Software; open-source development at https://github.com/cbyrohl/scida