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In this paper we consider a variant of population protocols in which agents are allowed to be connected by edges, known as the constructors model. During an interaction between two agents the relevant connecting edge can be formed,…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-11-01 Leszek Gasieniec , Paul Spirakis , Grzegorz Stachowiak

In this work, we study protocols so that populations of distributed processes can construct networks. In order to highlight the basic principles of distributed network construction we keep the model minimal in all respects. In particular,…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-07-11 Othon Michail , Paul G. Spirakis

Given a dense triplet set $\mathcal{T}$, there arise two interesting questions: Does there exists any phylogenetic network consistent with $\mathcal{T}$? And if so, can we find an effective algorithm to construct one? For cases of networks…

Populations and Evolution · Quantitative Biology 2009-01-13 Thu-Hien To , Michel Habib

Motivated by applications to sensor networks, as well as to many other areas, this paper studies the construction of minimum-degree spanning trees. We consider the classical node-register state model, with a weakly fair scheduler, and we…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-02-12 Lélia Blin , Pierre Fraigniaud

We show how to construct an overlay network of constant degree and diameter $O(\log n)$ in time $O(\log n)$ starting from an arbitrary weakly connected graph. We assume a synchronous communication network in which nodes can send messages to…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-28 Thorsten Götte , Kristian Hinnenthal , Christian Scheideler , Julian Werthmann

For a given set $\mathcal{L}$ of species and a set $\mathcal{T}$ of triplets on $\mathcal{L}$, one wants to construct a phylogenetic network which is consistent with $\mathcal{T}$, i.e which represents all triplets of $\mathcal{T}$. The…

Populations and Evolution · Quantitative Biology 2015-03-19 Michel Habib , Thu-Hien To

We study the problem of multiclass classification with an extremely large number of classes (k), with the goal of obtaining train and test time complexity logarithmic in the number of classes. We develop top-down tree construction…

Machine Learning · Computer Science 2015-11-17 Anna Choromanska , John Langford

Complex networks have become increasingly popular for modeling various real-world phenomena. Realistic generative network models are important in this context as they avoid privacy concerns of real data and simplify complex network research…

Data Structures and Algorithms · Computer Science 2015-04-24 Moritz von Looz , Christian L. Staudt , Henning Meyerhenke , Roman Prutkin

We consider the problem of constructing a communication infrastructure from scratch, for a collection of identical wireless nodes. Combinatorially, this means a) finding a set of links that form a strongly connected spanning graph on a set…

Networking and Internet Architecture · Computer Science 2012-10-17 Magnus M. Halldorsson , Pradipta Mitra

Galled trees are studied as a recombination model in theoretic population genetics. This class of phylogenetic networks has been generalized to tree-child networks, normal networks and tree-based networks by relaxing a structural condition.…

Populations and Evolution · Quantitative Biology 2019-08-05 Louxin Zhang

The parallel computational complexity or depth of growing network models is investigated. The networks considered are generated by preferential attachment rules where the probability of attaching a new node to an existing node is given by a…

Statistical Mechanics · Physics 2009-11-10 Benjamin Machta , Jonthan Machta

We consider the well-studied problem of learning a linear combination of $k$ ReLU activations with respect to a Gaussian distribution on inputs in $d$ dimensions. We give the first polynomial-time algorithm that succeeds whenever $k$ is a…

Machine Learning · Computer Science 2023-04-21 Sitan Chen , Zehao Dou , Surbhi Goel , Adam R Klivans , Raghu Meka

The wavelet tree has become a very useful data structure to efficiently represent and query large volumes of data in many different domains, from bioinformatics to geographic information systems. One problem with wavelet trees is their…

Data Structures and Algorithms · Computer Science 2016-10-20 José Fuentes-Sepúlveda , Erick Elejalde , Leo Ferres , Diego Seco

Phylogenetic trees canonically arise as embeddings of phylogenetic networks. We recently showed that the problem of deciding if two phylogenetic networks embed the same sets of phylogenetic trees is computationally hard, \blue{in…

Combinatorics · Mathematics 2021-04-13 Janosch Doecker , Simone Linz , Charles Semple

It is required to find an optimal order of constructing the edges of a network so as to minimize the sum of the weighted connection times of relevant pairs of vertices. Construction can be performed anytime anywhere in the network, with a…

Data Structures and Algorithms · Computer Science 2021-04-20 Igor Averbakh

We investigate a process of joining $k$ random spanning trees on a fixed clique $K_n$. The joined trees may not be disjoint and multiple edges are replaced by one simple edge. This process produces a simple graph $G$ on $n$~vertices with an…

Discrete Mathematics · Computer Science 2025-11-25 Blazej Wrobel , Dominik Bojko

The organizational development of growing random networks is investigated. These growing networks are built by adding nodes successively and linking each to an earlier node of degree k with attachment probability A_k. When A_k grows slower…

Statistical Mechanics · Physics 2009-10-31 P. L. Krapivsky , S. Redner

Existing parallel algorithms for wavelet tree construction have a work complexity of $O(n\log\sigma)$. This paper presents parallel algorithms for the problem with improved work complexity. Our first algorithm is based on parallel integer…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-17 Julian Shun

Trees are useful entities allowing to model data structures and hierarchical relationships in networked decision systems ubiquitously. An ordered tree is a rooted tree where the order of the subtrees (children) of a node is significant. In…

Data Structures and Algorithms · Computer Science 2020-11-10 Victor Parque , Tomoyuki Miyashita

Net-trees are a general purpose data structure for metric data that have been used to solve a wide range of algorithmic problems. We give a simple randomized algorithm to construct net-trees on doubling metrics using $O(n\log n)$ time in…

Computational Geometry · Computer Science 2018-09-06 Mahmoodreza Jahanseir , Donald R. Sheehy
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