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A model simulating transport of dense core vesicles (DCVs) in type II axonal terminals of Drosophila motoneurons has been developed. The morphology of type II terminals is characterized by the large number of en passant boutons. The lack of…

Neurons and Cognition · Quantitative Biology 2020-02-04 Ivan A. Kuznetsov , Andrey V. Kuznetsov

Adaptive importance sampling (AIS) algorithms are widely used to approximate expectations with respect to complicated target probability distributions. When the target has heavy tails, existing AIS algorithms can provide inconsistent…

Computation · Statistics 2023-10-26 Thomas Guilmeau , Nicola Branchini , Emilie Chouzenoux , Víctor Elvira

Using an Ising-like model of protein mechanical unfolding, we introduce a diffusive dynamics on its exactly known free energy profile, reducing the nonequilibrium dynamics of the model to a biased random walk. As an illustration, the model…

Biological Physics · Physics 2013-07-26 A. Pelizzola , M. Zamparo

To simply and effectively realize the trajectory tracking control of a bionic joint actuated by a single pneumatic artificial muscle (PAM), a cascaded control strategy is proposed based on the robust modeling method. Firstly, the…

Systems and Control · Electrical Eng. & Systems 2022-08-16 Yang Wang , Qiang Zhang , Xiao-hui Xiao

We present a multiscale simulation approach for hydroxide transport in aqueous solutions of potassium hydroxide, combining ab initio molecular dynamics (AIMD) simulations with force field ensemble averaging and lattice Monte Carlo…

Computational Physics · Physics 2025-04-09 Jonas Hänseroth , Daniel Sebastiani , Jakob Scholl , Karl Skadell , Christian Dreßler

Beams of radioactive heavy ions allow researchers to study rare and unstable atomic nuclei, shedding light into the internal structure of exotic nuclei and on how chemical elements are formed in stars. However, the extraction and transport…

Accelerator Physics · Physics 2025-06-25 Sergio Lopez-Caceres , Daniel Santiago-Gonzalez

Many cellular processes rely on the cell's ability to transport material to and from the nucleus. Networks consisting of many microtubules and actin filaments are key to this transport. Recently, the inhibition of intracellular transport…

Subcellular Processes · Quantitative Biology 2020-05-06 Shawn D. Ryan , Zachary McCarthy , Mykhailo Potomkin

Using classical molecular dynamics simulations, we investigate the mobility of ions in [Bmim][TFSI], a typical room temperature ionic liquid. Analyzing the trajectories of individual cations and anions, we estimate the time that ions spend…

Single ions held in linear Paul traps are promising candidates for a future quantum computer. Here, we discuss a two-layer microstructured segmented linear ion trap. The radial and axial potentials are obtained from numeric field…

Quantum Physics · Physics 2009-11-13 Stephan Schulz , Ulrich Poschinger , Kilian Singer , Ferdinand Schmidt-Kaler

In recent years, maritime safety and efficiency become more and more important across the world. Automatic Identification System (AIS) tracks vessel movement by onboard transceiver and terrestrial and/or satellite base station. The data…

Databases · Computer Science 2016-10-14 Shangbo Mao , Enmei Tu , Guanghao Zhang , Lily Rachmawati , Eshan Rajabally , Guang-Bin Huang

The motor-driven intracellular transport of vesicles to synaptic targets in the axons and dendrites of neurons plays a crucial role in normal cell function. Moreover, stimulus-dependent regulation of active transport is an important…

Neurons and Cognition · Quantitative Biology 2021-10-14 Paul C Bressloff

Automatic Speech Understanding (ASU) aims at human-like speech interpretation, providing nuanced intent, emotion, sentiment, and content understanding from speech and language (text) content conveyed in speech. Typically, training a robust…

Sound · Computer Science 2024-04-30 Tiantian Feng , Xuan Shi , Rahul Gupta , Shrikanth S. Narayanan

We propose a tractor atom interferometer (TAI) based on three-dimensional (3D) confinement and transport of split atomic wavefunction components in potential wells that follow programmed paths. The paths are programmed to split and…

Atomic Physics · Physics 2021-07-14 A. Duspayev , G. Raithel

In this paper, we derive an effective model for transport processes in periodically perforated elastic media, taking into account, e.g., cyclic elastic deformations as they occur in lung tissue due to respiratory movement. The underlying…

Analysis of PDEs · Mathematics 2022-06-15 Jonas Knoch , Markus Gahn , Maria Neuss-Radu , Nicolas Neuß

Ion channels are important proteins for physiological information transfer and functional control. To predict the microscopic origins of their voltage-conductance characteristics, we here applied dissipation-corrected targeted Molecular…

Biological Physics · Physics 2021-12-28 Miriam Jäger , Thorsten Koslowski , Steffen Wolf

Physics based numerical simulation has been carried out to probe the sub-gap density of states (DOS) and underlying electron transport properties of amorphous oxide based thin film transistors (TFTs). The DOS model of TFTs consists of…

Applied Physics · Physics 2024-02-15 D. Saha , Sachin Kulkarni

Cellular cargo can be bound to cytoskeletal filaments by one or multiple active or passive molecular motors. Recent experiments have shown that the presence of auxiliary, nondriving motors, results in an enhanced processivity of the cargo,…

Biomolecules · Quantitative Biology 2019-03-27 Filippo Posta , Maria R. D'Orsogna , Tom Chou

The interplay of noise and quantum coherence in transport gives rise to rich dynamics relevant for a variety of systems. In this work, we put forward a proposal for an experiment testing noise-induced transport in the vibrational modes of a…

Quantum Physics · Physics 2016-11-23 Cecilia Cormick , Christian T. Schmiegelow

Intracellular components explore the cytoplasm via active motor-driven transport in conjunction with passive diffusion. We model the motion of organelles in narrow tubular cells using analytical techniques and numerical simulations to study…

Biological Physics · Physics 2018-04-11 Saurabh Mogre , Elena F. Koslover

The Automatic Identification System (AIS) enables data-driven maritime surveillance but suffers from reliability issues and irregular intervals. We address vessel destination estimation using global-scope AIS data by proposing a…

Machine Learning · Computer Science 2025-12-16 Jin Sob Kim , Hyun Joon Park , Wooseok Shin , Dongil Park , Sung Won Han