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QuaPy is an open-source framework for performing quantification (a.k.a. supervised prevalence estimation), written in Python. Quantification is the task of training quantifiers via supervised learning, where a quantifier is a predictor that…

Machine Learning · Computer Science 2021-06-22 Alejandro Moreo , Andrea Esuli , Fabrizio Sebastiani

Trajectories, sequentially measured quantities that form a path, are an important presence in many different fields, from hadronic beams in physics to electrocardiograms in medicine. Trajectory anal-ysis requires the quantification and…

Quantitative Methods · Quantitative Biology 2023-08-23 Maurício Moreira-Soares , Eduardo Mossmann , Rui D. M. Travasso , José Rafael Bordin

AsaPy is a custom-made Python library designed to simplify and optimize the analysis of aerospace simulation data. Instead of introducing new methodologies, it excels in combining various established techniques, creating a unified,…

Any cutting-edge scientific research project requires a myriad of computational tools for data generation, management, analysis and visualization. Python is a flexible and extensible scientific programming platform that offered the perfect…

Quantitative Methods · Quantitative Biology 2008-03-14 Julius B. Lucks

The Active Matter Evaluation Package (AMEP) is a Python library for analyzing simulation data of particle-based and continuum simulations. It provides a powerful and simple interface for handling large data sets and for calculating and…

Arrays are such a rich and fundamental data type that they tend to be built into a language, either in the compiler or in a large low-level library. Defining this functionality at the user level instead provides greater flexibility for…

Programming Languages · Computer Science 2014-07-16 Jeff Bezanson , Jiahao Chen , Stefan Karpinski , Viral Shah , Alan Edelman

Wavelets and Multiwavelets have lately been adopted in Quantum Chemistry to overcome challenges presented by the two main families of basis sets: Gaussian atomic orbitals and plane waves. In addition to their numerical advantages (high…

Raman spectroscopy is a non-destructive and label-free chemical analysis technique, which plays a key role in the analysis and discovery cycle of various branches of science. Nonetheless, progress in Raman spectroscopic analysis is still…

Software that processes real-world data or that models a physical system must have some way of managing units. While simple approaches like the understood convention that all data are in a unit system (such as the MKS SI unit system) do…

Instrumentation and Methods for Astrophysics · Physics 2018-10-03 Nathan J. Goldbaum , John A. ZuHone , Matthew J. Turk , Kacper Kowalik , Anna L. Rosen

We introduce PrivPy, a practical privacy-preserving collaborative computation framework, especially optimized for machine learning tasks. PrivPy provides an easy-to-use and highly compatible Python programming front-end which supports…

Cryptography and Security · Computer Science 2020-04-22 Yi Li , Yitao Duan , Yu Yu , Shuoyao Zhao , Wei Xu

HolPy is an interactive theorem proving system implemented in Python. It uses higher-order logic as the logical foundation. Its main features include a pervasive use of macros in producing, checking, and storing proofs, a JSON-based format…

Logic in Computer Science · Computer Science 2020-01-28 Bohua Zhan

Background: Software is an important windows to offer a variety of complex instrument control and data processing for nuclear magnetic resonance (NMR) spectrometer. NMR software should allow researchers to flexibly implement various…

Quantitative Methods · Quantitative Biology 2021-03-30 Zao Liu , Kan Song , Zhiwei Chen

Physical reservoir computing (PRC) is a computing framework that harnesses the intrinsic dynamics of physical systems for computation. It offers a promising energy-efficient alternative to traditional von Neumann computing for certain…

Computational Engineering, Finance, and Science · Computer Science 2024-10-25 Harry Youel , Daniel Prestwood , Oscar Lee , Tianyi Wei , Kilian D. Stenning , Jack C. Gartside , Will R. Branford , Karin Everschor-Sitte , Hidekazu Kurebayashi

This paper presents SunPy (version 0.5), a community-developed Python package for solar physics. Python, a free, cross-platform, general-purpose, high-level programming language, has seen widespread adoption among the scientific community,…

Awkward Array is a library for performing NumPy-like computations on nested, variable-sized data, enabling array-oriented programming on arbitrary data structures in Python. However, imperative (procedural) solutions can sometimes be easier…

Programming Languages · Computer Science 2023-10-04 Ianna Osborne , Jim Pivarski , Ioana Ifrim , Angus Hollands , Henry Schreiner

The SunPy Project is a community of scientists and software developers creating an ecosystem of Python packages for solar physics. The project includes the sunpy core package as well as a set of affiliated packages. The sunpy core package…

In this paper we present an open source framework developed in Python and consisting of three distinct classes designed to manipulate in a simple and intuitive way both symbolic representations of neutrosophic sets over universes of various…

Artificial Intelligence · Computer Science 2024-04-10 Giorgio Nordo , Saeid Jafari , Arif Mehmood , Bhimraj Basumatary

MIRGE is a computational approach for scientific computing based on NumPy-like array computation, but using lazy evaluation to recast computation as data-flow graphs, where nodes represent immutable, multi-dimensional arrays. Evaluation of…

Machine learning has proved to be a useful tool for extracting knowledge from scientific data in numerous research fields, including astrophysics, genomics, and molecular dynamics. Often, data sets from these research areas need to be…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-21 Javier Álvarez Cid-Fuentes , Pol Álvarez , Salvi Solà , Kuninori Ishii , Rafael K. Morizawa , Rosa M. Badia

pPython seeks to provide a parallel capability that provides good speed-up without sacrificing the ease of programming in Python by implementing partitioned global array semantics (PGAS) on top of a simple file-based messaging library…