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Understanding the interaction between different drugs (drug-drug interaction or DDI) is critical for ensuring patient safety and optimizing therapeutic outcomes. Existing DDI datasets primarily focus on textual information, overlooking…

Machine Learning · Computer Science 2025-06-03 Tung-Lam Ngo , Ba-Hoang Tran , Duy-Cat Can , Trung-Hieu Do , Oliver Y. Chén , Hoang-Quynh Le

Timely and accurate lymphoma diagnosis is essential for guiding cancer treatment. Standard diagnostic practice combines hematoxylin and eosin (HE)-stained whole slide images with immunohistochemistry, flow cytometry, and molecular genetic…

Learning from limited amounts of data is the hallmark of intelligence, requiring strong generalization and abstraction skills. In a machine learning context, data-efficient methods are of high practical importance since data collection and…

Computer Vision and Pattern Recognition · Computer Science 2021-09-29 Björn Barz , Lorenzo Brigato , Luca Iocchi , Joachim Denzler

Background: Identifying new indications for approved drugs is a complex and time-consuming process that requires extensive knowledge of pharmacology, clinical data, and advanced computational methods. Recently, deep learning (DL) methods…

Machine Learning · Computer Science 2025-11-13 Shuting Jin , Yi Jiang , Yimin Liu , Tengfei Ma , Dongsheng Cao , Leyi Wei , Xiangrong Liu , Xiangxiang Zeng

Biomedical datasets are often constrained by stringent privacy requirements and frequently suffer from severe class imbalance. These two aspects hinder the development of accurate machine learning models. While generative AI offers a…

Computer Vision and Pattern Recognition · Computer Science 2025-09-03 Jan Carreras Boada , Rao Muhammad Umer , Carsten Marr

We exploit field guides to learn bird species recognition, in particular zero-shot recognition of unseen species. Illustrations contained in field guides deliberately focus on discriminative properties of each species, and can serve as side…

Computer Vision and Pattern Recognition · Computer Science 2023-11-06 Andrés C. Rodríguez , Stefano D'Aronco , Rodrigo Caye Daudt , Jan D. Wegner , Konrad Schindler

Foundation models have emerged as a powerful approach for processing electronic health records (EHRs), offering flexibility to handle diverse medical data modalities. In this study, we present a comprehensive benchmark that evaluates the…

Machine Learning · Computer Science 2025-07-22 Kunyu Yu , Rui Yang , Jingchi Liao , Siqi Li , Huitao Li , Irene Li , Yifan Peng , Rishikesan Kamaleswaran , Nan Liu

Multiple Instance Learning (MIL) has emerged as the best solution for Whole Slide Image (WSI) classification. It consists of dividing each slide into patches, which are treated as a bag of instances labeled with a global label. MIL includes…

Computer Vision and Pattern Recognition · Computer Science 2025-05-05 Ali Mammadov , Loic Le Folgoc , Julien Adam , Anne Buronfosse , Gilles Hayem , Guillaume Hocquet , Pietro Gori

In deep learning area, large-scale image datasets bring a breakthrough in the success of object recognition and retrieval. Nowadays, as the embodiment of innovation, the diversity of the industrial goods is significantly larger, in which…

Computer Vision and Pattern Recognition · Computer Science 2021-06-24 Fangyuan Lei , Da Huang , Jianjian Jiang , Ruijun Ma , Senhong Wang , Jiangzhong Cao , Yusen Lin , Qingyun Dai

Objective: Patient notes in electronic health records (EHRs) may contain critical information for medical investigations. However, the vast majority of medical investigators can only access de-identified notes, in order to protect the…

Computation and Language · Computer Science 2016-06-14 Franck Dernoncourt , Ji Young Lee , Ozlem Uzuner , Peter Szolovits

Hospitals in India still rely on handwritten medical records despite the availability of Electronic Medical Records (EMR), complicating statistical analysis and record retrieval. Handwritten records pose a unique challenge, requiring…

Computer Vision and Pattern Recognition · Computer Science 2024-11-13 Tavish Mankash , V. S. Chaithanya Kota , Anish De , Praveen Prakash , Kshitij Jadhav

Open-set few-shot hyperspectral image (HSI) classification aims to classify image pixels by using few labeled pixels per class, where the pixels to be classified may be not all from the classes that have been seen. To address the open-set…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Chun Liu , Chen Zhang , Zhuo Li , Zheng Li , Wei Yang

Motivation: A major challenge in the development of machine learning based methods in computational biology is that data may not be accurately labeled due to the time and resources required for experimentally annotating properties of…

Machine Learning · Computer Science 2017-11-15 Amina Asif , Wajid Arshad Abbasi , Farzeen Munir , Asa Ben-Hur , Fayyaz ul Amir Afsar Minhas

The rapid progress of photorealistic synthesis techniques has reached a critical point where the boundary between real and manipulated images starts to blur. Recently, a mega-scale deep face forgery dataset, ForgeryNet which comprised of…

In the real world, medical datasets often exhibit a long-tailed data distribution (i.e., a few classes occupy the majority of the data, while most classes have only a limited number of samples), which results in a challenging long-tailed…

Computer Vision and Pattern Recognition · Computer Science 2023-03-22 Lie Ju , Zhen Yu , Lin Wang , Xin Zhao , Xin Wang , Paul Bonnington , Zongyuan Ge

The focus of recent meta-learning research has been on the development of learning algorithms that can quickly adapt to test time tasks with limited data and low computational cost. Few-shot learning is widely used as one of the standard…

Computer Vision and Pattern Recognition · Computer Science 2020-06-18 Yonglong Tian , Yue Wang , Dilip Krishnan , Joshua B. Tenenbaum , Phillip Isola

Personal identification problem has been a major field of research in recent years. Biometrics-based technologies that exploit fingerprints, iris, face, voice and palmprints, have been in the center of attention to solve this problem.…

Computer Vision and Pattern Recognition · Computer Science 2015-12-15 Sina Akbari Mistani , Shervin Minaee , Emad Fatemizadeh

Data-efficient image classification using deep neural networks in settings, where only small amounts of labeled data are available, has been an active research area in the recent past. However, an objective comparison between published…

Computer Vision and Pattern Recognition · Computer Science 2021-08-31 Lorenzo Brigato , Björn Barz , Luca Iocchi , Joachim Denzler

As the size of accessible compound libraries expands to over 10 billion, the need for more efficient structure-based virtual screening methods is emerging. Different pre-screening methods have been developed for rapid screening, but there…

Biomolecules · Quantitative Biology 2025-03-07 Seonghwan Seo , Woo Youn Kim

The Vision-Language Foundation model is increasingly investigated in the fields of computer vision and natural language processing, yet its exploration in ophthalmology and broader medical applications remains limited. The challenge is the…

Computer Vision and Pattern Recognition · Computer Science 2024-08-20 Jiawei Du , Jia Guo , Weihang Zhang , Shengzhu Yang , Hanruo Liu , Huiqi Li , Ningli Wang