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Related papers: Group testing with nested pools

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Group testing enables to identify infected individuals in a population using a smaller number of tests than individual testing. To achieve this, group testing algorithms commonly assume knowledge of the number of infected individuals;…

Information Theory · Computer Science 2023-05-16 Chaorui Yao , Pavlos Nikolopoulos , Christina Fragouli

This article reviews a class of adaptive group testing procedures that operate under a probabilistic model assumption as follows. Consider a set of $N$ items, where item $i$ has the probability $p$ ($p_i$ in the generalized group testing)…

Methodology · Statistics 2021-02-19 Yaakov Malinovsky , Paul S. Albert

An instance of a group testing problem is a set of objects $\cO$ and an unknown subset $P$ of $\cO$. The task is to determine $P$ by using queries of the type ``does $P$ intersect $Q$'', where $Q$ is a subset of $\cO$. This problem occurs…

Combinatorics · Mathematics 2016-09-06 Emanuel Knill

A collector samples coupons with replacement from a pool containing $g$ \textit{uniform} groups of coupons, where "uniform group" means that all coupons in the group are equally likely to occur. For each $j = 1, \dots, g$ let $T_j$ be the…

Probability · Mathematics 2018-11-13 Aristides V. Doumas , Vassilis G. Papanicolaou

We have a large number of samples and we want to find the infected ones using as few number of tests as possible. We can use group testing which tells about a small group of people whether at least one of them is infected. Group testing is…

Quantitative Methods · Quantitative Biology 2020-05-07 Endre Csóka

A family of variable stage size multistage tests of simple hypotheses is described, based on efficient multistage sampling procedures. Using a loss function that is a linear combination of sampling costs and error probabilities, these tests…

Statistics Theory · Mathematics 2009-09-29 Jay Bartroff

We consider sequential hypothesis testing based on observations which are received in groups of random size. The observations are assumed to be independent both within and between the groups. We assume that the group sizes are independent…

Methodology · Statistics 2021-10-11 Andrey Novikov , Xóchitl Itxel Popoca-Jiménez

Consider a finite population of $N$ items, where item $i$ has a probability $p_i$ to be defective. The goal is to identify all items by means of group testing. This is the generalized group testing problem (hereafter GGTP). In the case of…

Other Statistics · Statistics 2020-02-28 Yaakov Malinovsky

In this paper, we introduce a variation of the group testing problem where each test is specified by an ordered subset of items and returns the first defective item in the specified order or returns null if there are no defectives. We refer…

Information Theory · Computer Science 2024-09-30 Waqar Mirza , Nikhil Karamchandani , Niranjan Balachandran

We consider the problem of detecting a small subset of defective items from a large set via non-adaptive "random pooling" group tests. We consider both the case when the measurements are noiseless, and the case when the measurements are…

Information Theory · Computer Science 2011-07-25 Chun Lam Chan , Pak Hou Che , Sidharth Jaggi , Venkatesh Saligrama

Background: Rapid testing for an infection is paramount during a pandemic to prevent continued viral spread and excess morbidity and mortality. This study aimed to determine whether alternative testing strategies based on sample pooling can…

Populations and Evolution · Quantitative Biology 2021-01-27 Timo de Wolff , Dirk Pflüger , Michael Rehme , Janin Heuer , Martin-Immanuel Bittner

Pooled testing offers an efficient solution to the unprecedented testing demands of the COVID-19 pandemic, although with potentially lower sensitivity and increased costs to implementation in some settings. Assessments of this trade-off…

Applications · Statistics 2021-07-13 Saskia Comess , Hannah Wang , Susan Holmes , Claire Donnat

This paper studies a two-stage model of experimentation, where the researcher first samples representative units from an eligible pool, then assigns each sampled unit to treatment or control. To implement balanced sampling and assignment,…

Econometrics · Economics 2023-08-22 Max Cytrynbaum

We propose a compressed sensing-based testing approach with a practical measurement design and a tuning-free and noise-robust algorithm for detecting infected persons. Compressed sensing results can be used to provably detect a small number…

Information Theory · Computer Science 2023-05-15 Hendrik Bernd Petersen , Bubacarr Bah , Peter Jung

Consider $n$ items, each of which is characterised by one of $d+1$ possible features in $\{0, \ldots, d\}$. We study the inference task of learning these types by queries on subsets, or pools, of the items that only reveal a form of…

Information Theory · Computer Science 2022-02-10 Max Hahn-Klimroth , Noela Müller

We study the problem usually referred to as group testing in the context of COVID-19. Given $n$ samples taken from patients, how should we select mixtures of samples to be tested, so as to maximize information and minimize the number of…

Methodology · Statistics 2020-05-14 Louis Abraham , Gary Bécigneul , Bernhard Schölkopf

Group testing has recently attracted significant attention from the research community due to its applications in diagnostic virology. An instance of the group testing problem includes a ground set of individuals which includes a small…

Information Theory · Computer Science 2022-02-25 Esmaeil Karimi , Anoosheh Heidarzadeh , Krishna R. Narayanan , Alex Sprintson

Large-scale testing is crucial in pandemic containment, but resources are often prohibitively constrained. We study the optimal application of pooled testing for populations that are heterogeneous with respect to an individual's infection…

Computer Science and Game Theory · Computer Science 2023-09-22 Simon Finster , Michelle González Amador , Edwin Lock , Francisco Marmolejo-Cossío , Evi Micha , Ariel D. Procaccia

Consider a collection of objects, some of which may be `bad', and a test which determines whether or not a given sub-collection contains no bad objects. The non-adaptive pooling (or group testing) problem involves identifying the bad…

Combinatorics · Mathematics 2016-09-06 David J. Balding , David C. Torney

We consider the problem of choosing the best of $n$ samples, out of a large random pool, when the sampling of each member is associated with a certain cost. The quality (worth) of the best sample clearly increases with $n$, but so do the…

Statistics Theory · Mathematics 2015-06-16 Joseph D. Skufca , Daniel ben-Avraham