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Microscopy research often requires recovering particle-size distributions in three dimensions from only a few (10 - 200) profile measurements in the section. This problem is especially relevant for petrographic and mineralogical studies,…

Methodology · Statistics 2022-02-16 Ekaterina Poliakova

Super-resolution microscopy is crucial for imaging sub-wavelength biological structures. However, most techniques rely on nonlinear saturation or stochastic switching of emitters, limiting imaging speed and increasing phototoxicity. Here,…

Recently, the Magnetic Resonance Imaging (MRI) images have limited and unsatisfactory resolutions due to various constraints such as physical, technological and economic considerations. Super-resolution techniques can obtain high-resolution…

Computer Vision and Pattern Recognition · Computer Science 2019-02-14 Yinghua Li , Bin Song , Jie Guo , Xiaojiang Du , Mohsen Guizani

Over the last decade, single-molecule optical microscopy has become the gold-standard approach to decipher complex molecular processes in cellular environments. [1-3] Single-molecule fluorescence microscopy has several advantages such as…

Biological Physics · Physics 2017-11-15 Edakkattuparambil Sidharth Shibu , Nadezda Varkentina , Laurent Cognet , Brahim Lounis

Multiview super-resolution image reconstruction (SRIR) is often cast as a resampling problem by merging non-redundant data from multiple low-resolution (LR) images on a finer high-resolution (HR) grid, while inverting the effect of the…

Computer Vision and Pattern Recognition · Computer Science 2017-05-04 Vildan Atalay Aydin , Hassan Foroosh

Precise manipulation of single molecules has already led to remarkable insights in physics, chemistry, biology and medicine. However, widespread adoption of single-molecule techniques has been impeded by equipment cost and the laborious…

Biological Physics · Physics 2015-05-14 Ken Halvorsen , Wesley P. Wong

An analysis of the Millimetre Astronomy Legacy Team 90 GHz (MALT90) survey has produced a sample of 27 candidate dense molecular clumps with large collapse motions, as revealed by large ``blue'' asymmetrical line profiles of the optically…

Studies of galaxy populations classified according to their kinematic behaviours and dynamical state using the Projected Phase Space Diagram (PPSD) are affected by misclassification and contamination, leading to systematic errors in…

Single image super-resolution (SISR) is the task of inferring a high-resolution image from a single low-resolution image. Recent research on super-resolution has achieved great progress due to the development of deep convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2019-11-22 Zhengyang Lu , Ying Chen

Deep learning (DL) models are capable of successfully exploiting latent representations in MR data and have become state-of-the-art for accelerated MRI reconstruction. However, undersampling the measurements in k-space as well as the over-…

Image and Video Processing · Electrical Eng. & Systems 2023-03-09 Mevan Ekanayake , Kamlesh Pawar , Gary Egan , Zhaolin Chen

The analysis of optical images of galaxy-galaxy strong gravitational lensing systems can provide important information about the distribution of dark matter at small scales. However, the modeling and statistical analysis of these images is…

Cosmology and Nongalactic Astrophysics · Physics 2020-11-30 Adam Coogan , Konstantin Karchev , Christoph Weniger

Single-pixel imaging, originally developed in light optics, facilitates fast three-dimensional sample reconstruction, as well as probing with light wavelengths undetectable by conventional multi-pixel detectors. However, the spatial…

The development of X-ray Free Electron Lasers (XFELs) has opened numerous opportunities to probe atomic structure and ultrafast dynamics of various materials. Single Particle Imaging (SPI) with XFELs enables the investigation of biological…

Computer Vision and Pattern Recognition · Computer Science 2023-11-29 Zhantao Chen , Cong Wang , Mingye Gao , Chun Hong Yoon , Jana B. Thayer , Joshua J. Turner

Two-view structure from motion (SfM) is the cornerstone of 3D reconstruction and visual SLAM (vSLAM). Many existing end-to-end learning-based methods usually formulate it as a brute regression problem. However, the inadequate utilization of…

Computer Vision and Pattern Recognition · Computer Science 2022-10-12 Yuxi Xiao , Li Li , Xiaodi Li , Jian Yao

The performance of organic optoelectronic devices is critically dependent on how molecules orient within organic thin films. Yet, standard characterization techniques only reveal the first and second moments of the molecular orientation…

Cell segmentation is essential in biomedical research for analyzing cellular morphology and behavior. Deep learning methods, particularly convolutional neural networks (CNNs), have revolutionized cell segmentation by extracting intricate…

Image and Video Processing · Electrical Eng. & Systems 2024-08-27 Boyuan Peng , Jiaju Chen , P. Bilha Githinji , Ijaz Gul , Qihui Ye , Minjiang Chen , Peiwu Qin , Xingru Huang , Chenggang Yan , Dongmei Yu , Jiansong Ji , Zhenglin Chen

Point-wise localization of individual fluorophores is a critical step in super-resolution microscopy and single particle tracking. Although the methods are limited by the accuracy in localizing individual flourophores, this point-wise…

Biological Physics · Physics 2017-05-08 Martin Lindén , Vladimir Ćurić , Elias Amselem , Johan Elf

Single particle cryo-electron microscopy is a vital tool for 3D characterization of protein structures. A typical workflow involves acquiring projection images of a collection of randomly oriented particles, picking and classifying…

Image and Video Processing · Electrical Eng. & Systems 2021-03-22 S. V. Venkatakrishnan , Puneet Juneja , Hugh O'Neill

The number of photons available by coherent X-ray scattering from a single biomolecule is considerably less because of the extremely small elastic-scattering cross-section and low damage threshold. Even with a high X-ray flux of 3 x 10to 12…

Optics · Physics 2009-11-13 Tsumoru Shintake

Weakly-supervised learning (WSL) has recently triggered substantial interest as it mitigates the lack of pixel-wise annotations. Given global image labels, WSL methods yield pixel-level predictions (segmentations), which enable to interpret…

Computer Vision and Pattern Recognition · Computer Science 2021-10-12 Soufiane Belharbi , Jérôme Rony , Jose Dolz , Ismail Ben Ayed , Luke McCaffrey , Eric Granger