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In the recent COVID-19 pandemic we assisted at a sequence of epidemic waves intertwined by anomalous fade-outs with periods of low but persistent epidemic prevalence. These long-living epidemic states complicate epidemic control and…

Physics and Society · Physics 2025-08-27 Javier Aguilar , Beatriz Arregui García , Raúl Toral , Sandro Meloni , Jose J. Ramasco

Understanding dynamics of an outbreak like that of COVID-19 is important in designing effective control measures. This study aims to develop an agent based model that compares changes in infection progression by manipulating different…

Populations and Evolution · Quantitative Biology 2021-06-24 Anik Burman , Sayak Chatterjee , Pramit Ghosh , Indranil Mukhokadhyay

In this paper, we introduce a novel modeling framework for incorporating fear of infection and frustration with social distancing into disease dynamics. We show that the resulting SEIR behavior-perception model has three principal modes of…

Populations and Evolution · Quantitative Biology 2020-08-14 Matthew D. Johnston , Bruce Pell

It is widely accepted that the number of reported cases during the first stages of the COVID-19 pandemic severely underestimates the number of actual cases. We leverage delay embedding theorems of Whitney and Takens and use Gaussian Process…

Quantitative Methods · Quantitative Biology 2022-02-02 G. A. Kevrekidis , Z. Rapti , Y. Drossinos , P. G. Kevrekidis , M. A. Barmann , Q. Y. Chen , J. Cuevas-Maraver

We model further development of the COVID-19 epidemic in the UK given the current data and assuming different scenarios of handling the epidemic. In this research, we further extend the stochastic model suggested in \cite{us} and…

Populations and Evolution · Quantitative Biology 2020-04-10 Anatoly Zhigljavsky , Roger Whitaker , Ivan Fesenko , Kobi Kremnizer , Jack Noonan

During Covid-19 outbreaks, school closures are employed as part of governments' non-pharmaceutical interventions around the world to reduce the number of contacts and keep the reproduction number below 1. Yet, prolonged school closures have…

Applications · Statistics 2021-03-22 Kevin Kunzmann , Camilla Lingjaerde , Sheila Bird , Sylvia Richardson

India was under a grave threat from the second wave of the COVID-19 pandemic particularly in the beginning of May 2021. The situation appeared rather gloomy as the number of infected individuals/active cases had increased alarmingly during…

Physics and Society · Physics 2022-02-02 R. Gopal , V. K. Chandrasekar , M. Lakshmanan

We present a System Dynamics (SD) model of the Covid-19 pandemic spread in India. The detailed age-structured compartment-based model endogenously captures various disease transmission pathways, expanding significantly from the standard…

Populations and Evolution · Quantitative Biology 2020-04-21 Jayendran Venkateswaran , Om Damani

We investigated daily COVID-19 cases and deaths in the 337 lower tier local authority regions in England and Wales to better understand how the disease propagated over a 15-month period. Population density scaling models revealed residual…

Populations and Evolution · Quantitative Biology 2022-04-07 Jack Sutton , Golnaz Shahtahmassebi , Haroldo V. Ribeiro , Quentin S. Hanley

COVID-19 has forced quarantine measures in several countries across the world. These measures have proven to be effective in significantly reducing the prevalence of the virus. To date, no effective treatment or vaccine is available. In the…

Populations and Evolution · Quantitative Biology 2020-12-02 Davide Faranda , Tommaso Alberti

In regard to infectious diseases socioeconomic determinants are strongly associated with differential exposure and susceptibility however they are seldom accounted for by standard compartmental infectious disease models. These associations…

Applications · Statistics 2022-11-28 Alison C Hale , Jonathan M Read , Christopher P Jewell

Social distancing strategies have been adopted by governments to manage the COVID-19 pandemic, since the first outbreak began. However, further epidemic waves keep out the return of economic and social activities to their standard levels of…

Optimization and Control · Mathematics 2021-06-07 J. E. Sereno , A. D' Jorge , A. Ferramosca , E. A. Hernandez-Vargas , A. H. Gonzalez

A deterministic model with testing of infected individuals has been proposed to investigate the potential consequences of the impact of testing strategy. The model exhibits global dynamics concerning the disease-free and a unique endemic…

Populations and Evolution · Quantitative Biology 2023-05-24 Sarita Bugalia , Jai Prakash Tripathi

An urgent problem in controlling COVID-19 spreading is to understand the role of undocumented infection. We develop a five-state model for COVID-19, taking into account the unique features of the novel coronavirus, with key parameters…

Populations and Evolution · Quantitative Biology 2020-03-27 Yong-Shang Long , Zheng-Meng Zhai , Li-Lei Han , Jie Kang , Yi-Lin Li , Zhao-Hua Lin , Lang Zeng , Da-Yu Wu , Chang-Qing Hao , Ming Tang , Zonghua Liu , Ying-Cheng Lai

The spread of COVID-19 during the initial phase of the first half of 2020 was curtailed to a larger or lesser extent through measures of social distancing imposed by most countries. In this work, we link directly, through machine learning…

Populations and Evolution · Quantitative Biology 2020-08-20 G. D. Barmparis , G. P. Tsironis

One of the difficulties in monitoring an ongoing pandemic is deciding on the metric that best describes its status when multiple intercorrelated measurements are available. Having a single measure, such as the effective reproduction number…

Applications · Statistics 2022-04-20 Ben Swallow , Wen Xiang , Jasmina Panovska-Griffiths

Mobility data at EU scale can help understand the dynamics of the pandemic and possibly limit the impact of future waves. Still, since a reliable and consistent method to measure the evolution of contagion at international level is missing,…

Attempts to curb the spread of coronavirus by introducing strict quarantine measures apparently have different effect in different countries: while the number of new cases has reportedly decreased in China and South Korea, it still exhibit…

Populations and Evolution · Quantitative Biology 2020-03-24 Vitaly Volpert , Malay Banerjee , Sergei Petrovskii

Epidemiological simulations as a method are used to better understand and predict the spreading of infectious diseases, for example of COVID-19. This paper presents an approach that combines person-centric data-driven human mobility…

Once an epidemic outbreak has been effectively contained through non-pharmaceutical interventions, a safe protocol is required for the subsequent release of social distancing restrictions to prevent a disastrous resurgence of the infection.…