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This paper explores whether the use of drug reviews and social media could be leveraged as potential alternative sources for pharmacovigilance of adverse drug reactions (ADRs). We examined the performance of BERT alongside two variants that…

Computation and Language · Computer Science 2020-04-21 Brent Biseda , Katie Mo

In this paper, we focus on the classification of tweets as sources of potential signals for adverse drug effects (ADEs) or drug reactions (ADRs). Following the intuition that text and drug structure representations are complementary, we…

Quantitative Methods · Quantitative Biology 2023-11-21 Andrey Sakhovskiy , Elena Tutubalina

Adverse drug reactions (ADRs) are one of the leading causes of mortality in health care. Current ADR surveillance systems are often associated with a substantial time lag before such events are officially published. On the other hand,…

Information Retrieval · Computer Science 2018-02-15 Shashank Gupta , Manish Gupta , Vasudeva Varma , Sachin Pawar , Nitin Ramrakhiyani , Girish K. Palshikar

This paper presents our approach for task 2 and task 3 of Social Media Mining for Health (SMM4H) 2020 shared tasks. In task 2, we have to differentiate adverse drug reaction (ADR) tweets from nonADR tweets and is treated as binary…

Computation and Language · Computer Science 2020-06-30 Katikapalli Subramanyam Kalyan , S. Sangeetha

Adverse drug reactions (ADRs) are one of the leading causes of mortality in health care. Current ADR surveillance systems are often associated with a substantial time lag before such events are officially published. On the other hand,…

Information Retrieval · Computer Science 2018-02-15 Shashank Gupta , Manish Gupta , Vasudeva Varma , Sachin Pawar , Nitin Ramrakhiyani , Girish K. Palshikar

Social media is an useful platform to share health-related information due to its vast reach. This makes it a good candidate for public-health monitoring tasks, specifically for pharmacovigilance. We study the problem of extraction of…

Information Retrieval · Computer Science 2017-09-07 Shashank Gupta , Sachin Pawar , Nitin Ramrakhiyani , Girish Palshikar , Vasudeva Varma

Social media has grown to be a crucial information source for pharmacovigilance studies where an increasing number of people post adverse reactions to medical drugs that are previously unreported. Aiming to effectively monitor various…

Machine Learning · Computer Science 2018-02-19 Shaika Chowdhury , Chenwei Zhang , Philip S. Yu

Adverse drug reactions (ADRs) are unwanted or harmful effects experienced after the administration of a certain drug or a combination of drugs, presenting a challenge for drug development and drug administration. In this paper, we present a…

Computation and Language · Computer Science 2019-05-29 Maksim Belousov , Nikola Milosevic , William Dixon , Goran Nenadic

In recent years, Internet users are reporting Adverse Drug Events (ADE) on social media, blogs and health forums. Because of the large volume of reports, pharmacovigilance is seeking to resort to NLP to monitor these outlets. We propose for…

Computation and Language · Computer Science 2021-05-20 Beatrice Portelli , Daniele Passabì , Edoardo Lenzi , Giuseppe Serra , Enrico Santus , Emmanuele Chersoni

With the increase in popularity of deep learning models for natural language processing (NLP) tasks, in the field of Pharmacovigilance, more specifically for the identification of Adverse Drug Reactions (ADRs), there is an inherent need for…

Information Retrieval · Computer Science 2020-04-01 Ramya Tekumalla , Juan M. Banda

Automatic monitoring of adverse drug events (ADEs) or reactions (ADRs) is currently receiving significant attention from the biomedical community. In recent years, user-generated data on social media has become a valuable resource for this…

Computation and Language · Computer Science 2023-11-21 Ilseyar Alimova , Elena Tutubalina

Adverse drug reaction (ADR) detection is an essential task in the medical field, as ADRs have a gravely detrimental impact on patients' health and the healthcare system. Due to a large number of people sharing information on social media…

Computation and Language · Computer Science 2023-08-21 Yunzhi Qiu , Xiaokun Zhang , Weiwei Wang , Tongxuan Zhang , Bo Xu , Hongfei Lin

We present an algorithm based on multi-layer transformers for identifying Adverse Drug Reactions (ADR) in social media data. Our model relies on the properties of the problem and the characteristics of contextual word embeddings to extract…

Computation and Language · Computer Science 2021-05-25 Payam Karisani , Jinho D. Choi , Li Xiong

This paper outlines the performance evaluation of a system for adverse drug event normalization, developed by the Data Science for Digital Health (DS4DH) group for the Social Media Mining for Health Applications (SMM4H) 2023 shared task 5.…

Computation and Language · Computer Science 2023-11-07 Anthony Yazdani , Hossein Rouhizadeh , David Vicente Alvarez , Douglas Teodoro

Adverse drug reactions / events (ADR/ADE) have a major impact on patient health and health care costs. Detecting ADR's as early as possible and sharing them with regulators, pharma companies, and healthcare providers can prevent morbidity…

Computation and Language · Computer Science 2022-01-07 Hasham Ul Haq , Veysel Kocaman , David Talby

In this work, we present the first corpus for German Adverse Drug Reaction (ADR) detection in patient-generated content. The data consists of 4,169 binary annotated documents from a German patient forum, where users talk about health issues…

Computation and Language · Computer Science 2022-08-04 Lisa Raithel , Philippe Thomas , Roland Roller , Oliver Sapina , Sebastian Möller , Pierre Zweigenbaum

Adverse drug reaction (ADR) prediction plays a crucial role in both health care and drug discovery for reducing patient mortality and enhancing drug safety. Recently, many studies have been devoted to effectively predict the drug-ADRs…

Information Retrieval · Computer Science 2023-08-08 Haoxuan Li , Taojun Hu , Zetong Xiong , Chunyuan Zheng , Fuli Feng , Xiangnan He , Xiao-Hua Zhou

With the advancements in Artificial intelligence (AI) and the accumulation of healthrelated big data, it has become increasingly feasible and commonplace to leverage machine learning technologies to analyze clinical and omics metadata to…

Genomics · Quantitative Biology 2022-04-14 Attayeb Mohsen , Lokesh P. Tripathi , Kenji Mizuguchi

As a major social media platform, Twitter publishes a large number of user-generated text (tweets) on a daily basis. Mining such data can be used to address important social, public health, and emergency management issues that are…

Computation and Language · Computer Science 2021-12-07 Qing Han , Shubo Tian , Jinfeng Zhang

Monitoring the biomedical literature for cases of Adverse Drug Reactions (ADRs) is a critically important and time consuming task in pharmacovigilance. The development of computer assisted approaches to aid this process in different forms…

Computation and Language · Computer Science 2018-04-25 Diego Saldana Miranda
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