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We build a symmetric monoidal and compact closed bicategory by combining spans and cospans inside a topos. This can be used as a framework in which to study open networks and diagrammatic languages. We illustrate this framework with Coecke…

Category Theory · Mathematics 2018-03-05 Daniel Cicala

Process mining, i.e., a sub-field of data science focusing on the analysis of event data generated during the execution of (business) processes, has seen a tremendous change over the past two decades. Starting off in the early 2000's, with…

Software Engineering · Computer Science 2019-05-16 Alessandro Berti , Sebastiaan J. van Zelst , Wil van der Aalst

Linear operators and optimisation are at the core of many algorithms used in signal and image processing, remote sensing, and inverse problems. For small to medium-scale problems, existing software packages (e.g., MATLAB, Python numpy and…

Mathematical Software · Computer Science 2019-07-30 Matteo Ravasi , Ivan Vasconcelos

Applied category theory often studies symmetric monoidal categories (SMCs) whose morphisms represent open systems. These structures naturally accommodate complex wiring patterns, leveraging (co)monoidal structures for splitting and merging…

Category Theory · Mathematics 2025-09-03 Marius Furter , Yujun Huang , Gioele Zardini

In this work, we present scikit-fingerprints, a Python package for computation of molecular fingerprints for applications in chemoinformatics. Our library offers an industry-standard scikit-learn interface, allowing intuitive usage and easy…

Software Engineering · Computer Science 2025-08-12 Jakub Adamczyk , Piotr Ludynia

This article serves as a preliminary introduction to the design of a new, open-source applied and computational category theory framework, named Categorica, built on top of the Wolfram Language. Categorica allows one to configure and…

Category Theory · Mathematics 2024-03-26 Jonathan Gorard

When designing plans in engineering, it is often necessary to consider attributes associated to objects, e.g. the location of a robot. Our aim in this paper is to incorporate attributes into existing categorical formalisms for planning,…

Category Theory · Mathematics 2021-01-27 Spencer Breiner , John S. Nolan

We give an alternate conception of string diagrams as labeled 1-dimensional oriented cobordisms, the operad of which we denote by Cob/O, where O is the set of string labels. The axioms of traced (symmetric monoidal) categories are fully…

Category Theory · Mathematics 2018-06-06 David I. Spivak , Patrick Schultz , Dylan Rupel

We present the proof assistant homotopy.io for working with finitely-presented semistrict higher categories. The tool runs in the browser with a point-and-click interface, allowing direct manipulation of proof objects via a graphical…

Logic in Computer Science · Computer Science 2024-02-21 Nathan Corbyn , Lukas Heidemann , Nick Hu , Chiara Sarti , Calin Tataru , Jamie Vicary

We present Simphony, a free and open-source software toolbox for abstracting and simulating photonic integrated circuits, implemented in Python. The toolbox is both fast and easily extensible; plugins can be written to provide compatibility…

Emerging Technologies · Computer Science 2020-09-14 Sequoia Ploeg , Hyrum Gunther , Ryan M. Camacho

We introduce a category-theoreticabstraction of a syntax with auxiliary functions, called an admissiblemonad morphism. Relying on an abstract form of structural recursion,we then design generic tools to construct admissible monad…

Logic in Computer Science · Computer Science 2022-04-11 Tom Hirschowitz , Ambroise Lafont

In previous work ("From signatures to monads in UniMath"), we described a category-theoretic construction of abstract syntax from a signature, mechanized in the UniMath library based on the Coq proof assistant. In the present work, we…

Programming Languages · Computer Science 2021-12-15 Benedikt Ahrens , Ralph Matthes , Anders Mörtberg

In recent years, diagrammatic languages have been shown to be a powerful and expressive tool for reasoning about physical, logical, and semantic processes represented as morphisms in a monoidal category. In particular, categorical quantum…

Artificial Intelligence · Computer Science 2012-04-19 Aleks Kissinger

Univalent categories constitute a well-behaved and useful notion of category in univalent foundations. The notion of univalence has subsequently been generalized to bicategories and other structures in (higher) category theory. Here, we…

Logic in Computer Science · Computer Science 2023-08-17 Kobe Wullaert , Ralph Matthes , Benedikt Ahrens

Applied category theory often studies symmetric monoidal categories (SMCs) whose morphisms represent open systems. These structures naturally accommodate complex wiring patterns, leveraging (co)monoidal structures for splitting and merging…

Category Theory · Mathematics 2026-03-11 Marius Furter , Yujun Huang , Gioele Zardini

MOCVXPY is an open-source Python library for convex vector optimization. It is built on top of CVXPY, a domain-specific language for single-objective convex optimization. MOCVXPY enables practitioners to describe their convex vector…

Optimization and Control · Mathematics 2025-10-27 Ludovic Salomon , Daniel Dörfler , Andreas Löhne

We present an unbiased theory of symmetric multicategories, where sequences are replaced by families. To be effective, this approach requires an explicit consideration of indexing and reindexing of objects and arrows, handled by the double…

Category Theory · Mathematics 2024-09-17 Claudio Pisani

Pre-trained language models and other generative models have revolutionized NLP and beyond. However, these models tend to reproduce undesirable biases present in their training data. Also, they may overlook patterns that are important but…

Computation and Language · Computer Science 2023-03-10 Germán Kruszewski , Jos Rozen , Marc Dymetman

We introduce GraSPy, a Python library devoted to statistical inference, machine learning, and visualization of random graphs and graph populations. This package provides flexible and easy-to-use algorithms for analyzing and understanding…

Social and Information Networks · Computer Science 2019-10-25 Jaewon Chung , Benjamin D. Pedigo , Eric W. Bridgeford , Bijan K. Varjavand , Hayden S. Helm , Joshua T. Vogelstein

The linear decomposition attack provides a serious obstacle to direct applications of noncommutative groups and monoids (or semigroups) in cryptography. To overcome this issue we propose to look at monoids with only big representations, in…

Representation Theory · Mathematics 2024-02-13 Mikhail Khovanov , Maithreya Sitaraman , Daniel Tubbenhauer
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