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Related papers: Birth-Burst in Evolving Networks

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We propose a natural model of evolving weighted networks in which new links are not necessarily connected to new nodes. The model allows a newly added link to connect directly two nodes already present in the network. This is plausible in…

Physics and Society · Physics 2011-08-18 Shinji Tanimoto

The evolution processes of complex systems carry key information in the systems' functional properties. Applying machine learning algorithms, we demonstrate that the historical formation process of various networked complex systems can be…

Physics and Society · Physics 2024-03-25 Junya Wang , Yi-Jiao Zhang , Cong Xu , Jiaze Li , Jiachen Sun , Jiarong Xie , Ling Feng , Tianshou Zhou , Yanqing Hu

Modularity structures are common in various social and biological networks. However, its dynamical origin remains an open question. In this work, we set up a dynamical model describing the evolution of a social network. Based on the…

Physics and Society · Physics 2011-08-19 Menghui Li , Shuguang Guan , Choy-Heng Lai

We propose a model for the growth of weighted networks that couples the establishment of new edges and vertices and the weights' dynamical evolution. The model is based on a simple weight-driven dynamics and generates networks exhibiting…

Disordered Systems and Neural Networks · Physics 2009-11-10 Alain Barrat , Marc Barthelemy , Alessandro Vespignani

Network data is prevalent in numerous big data applications including economics and health networks where it is of prime importance to understand the latent structure of network. In this paper, we model the network using the…

Statistics Theory · Mathematics 2023-08-30 Sohom Bhattacharya , Jianqing Fan , Jikai Hou

We propose a simple preferential attachment model of growing network using the complementary probability of Barab\'asi-Albert (BA) model, i.e., $\Pi(k_i) \propto 1-\frac{k_i}{\sum_j k_j}$. In this network, new nodes are preferentially…

Physics and Society · Physics 2016-01-20 A. Lachgar , A. Achahbar

Recently, the structural controllability theory has been introduced to analyze the Protein-Protein Interaction (PPI) network. The indispensable nodes, which their removal increase the number of driver nodes to control the network, are found…

Computational Physics · Physics 2016-09-12 Xizhe Zhang , Huaizhen Wang , Yunyi Yang

We consider an interacting particle process on a graph which, from a macroscopic point of view, looks like $\Z^d$ and, at a microscopic level, is a complete graph of degree $N$ (called a patch). There are two birth rates: an inter-patch one…

Probability · Mathematics 2012-02-21 Lamia Belhadji , Daniela Bertacchi , Fabio Zucca

Evolving out-of-equilibrium networks have been under intense scrutiny recently. In many real-world settings the number of links added per new node is not constant but depends on the time at which the node is introduced in the system. This…

Physics and Society · Physics 2009-10-08 David M. D. Smith , Jukka-Pekka Onnela , Neil F. Johnson

This paper presents a comprehensive analysis of the degree statistics in models for growing networks where new nodes enter one at a time and attach to one earlier node according to a stochastic rule. The models with uniform attachment,…

Statistical Mechanics · Physics 2015-05-13 C. Godreche , H. Grandclaude , J. M. Luck

Several network growth models have been proposed in the literature that attempt to incorporate properties of citation networks. Generally, these models aim at retaining the degree distribution observed in real-world networks. In this work,…

Social and Information Networks · Computer Science 2020-02-19 Dattatreya Mohapatra , Siddharth Pal , Soham De , Ponnurangam Kumaraguru , Tanmoy Chakraborty

It is now generally assumed that the heterogeneity of most networks in nature probably arises via preferential attachment of some sort. However, the origin of various other topological features, such as degree-degree correlations and…

Adaptation and Self-Organizing Systems · Physics 2010-03-05 Samuel Johnson , J. Marro , Joaquin J. Torres

Many important real-world networks manifest "small-world" properties such as scale-free degree distributions, small diameters, and clustering. The most common model of growth for these networks is "preferential attachment", where nodes…

Quantitative Methods · Quantitative Biology 2009-11-13 Samarth Swarup , Les Gasser

Complex networks have non-trivial characteristics and appear in many real-world systems. Such networks are vitally important, but their full underlying dynamics are not completely understood. Utilizing new data sources, however, can unveil…

Social and Information Networks · Computer Science 2016-08-26 Michael Fire , Carlos Guestrin

We consider evolution of a large population, where fitness of each organism is defined by many phenotypical traits. These traits result from expression of many genes. We propose a new model of gene regulation, where gene expression is…

Populations and Evolution · Quantitative Biology 2016-09-29 John Reinitz , Sergey Vakulenko , Dmitri Grigoriev , Andreas Weber

We investigate the evolution of populations of random Boolean networks under selection for robustness of the dynamics with respect to the perturbation of the state of a node. The fitness landscape contains a huge plateau of maximum fitness…

Populations and Evolution · Quantitative Biology 2009-11-13 Tamara Mihaljev , Barbara Drossel

We discuss a model for evolutionary game dynamics in a growing, network-structured population. In our model, new players can either make connections to random preexisting players or preferentially attach to those that have been successful…

Physics and Society · Physics 2015-05-13 J. Poncela , J. Gomez-Gardenes , A. Traulsen , Y. Moreno

Accurately determining and classifying the structure of complex networks is the focus of much current research. One class of network of particular interest are metabolic pathways, which have previously been studied from a graph theoretical…

Mathematical Physics · Physics 2012-10-10 Henry Dorrian , Kieran Smallbone , Jon borresen

We introduce a graph generating model aimed at representing the evolution of protein interaction networks. The model is based on the hypotesis of evolution by duplications and divergence of the genes which produce proteins. The obtained…

Statistical Mechanics · Physics 2007-05-23 A. Vazquez , A. Flammini , A. Maritan , A. Vespignani

A rank-dependent deactivation mechanism is introduced to network evolution. The growth dynamics of the network is based on a finite memory of individuals, which is implemented by deactivating one site at each time step. The model shows…

Physics and Society · Physics 2015-05-14 Xin-Jian Xu , Ming-Chen Zhou