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The worldwide spread of pneumonia caused by a novel coronavirus poses an unprecedented challenge to the world's medical resources and prevention and control measures. Covid-19 attacks not only the lungs, making it difficult to breathe and…

Image and Video Processing · Electrical Eng. & Systems 2020-05-05 Dailin Lv , Wuteng Qi , Yunxiang Li , Lingling Sun , Yaqi Wang

The new coronavirus has caused more than one million deaths and continues to spread rapidly. This virus targets the lungs, causing respiratory distress which can be mild or severe. The X-ray or computed tomography (CT) images of lungs can…

A dataset of COVID-19-related scientific literature is compiled, combining the articles from several online libraries and selecting those with open access and full text available. Then, hierarchical nonnegative matrix factorization is used…

Automated information extraction with natural language processing (NLP) tools is required to gain systematic insights from the large number of COVID-19 publications, reports and social media posts, which far exceed human processing…

Other Quantitative Biology · Quantitative Biology 2025-06-16 Salma Kazemi Rashed , Rafsan Ahmed , Johan Frid , Sonja Aits

COVID-19 appeared abruptly in early 2020, requiring a rapid response amid a context of great uncertainty. Good quality data and knowledge was initially lacking, and many early models had to be developed with causal assumptions and…

Artificial Intelligence · Computer Science 2024-03-22 Steven Mascaro , Yue Wu , Ross Pearson , Owen Woodberry , Jessica Ramsay , Tom Snelling , Ann E. Nicholson

The health and socioeconomic difficulties caused by the COVID-19 pandemic continues to cause enormous tensions around the world. In particular, this extraordinary surge in the number of cases has put considerable strain on health care…

Image and Video Processing · Electrical Eng. & Systems 2021-05-05 Hossein Aboutalebi , Saad Abbasi , Mohammad Javad Shafiee , Alexander Wong

We present a workflow for clinical data analysis that relies on Bayesian Structure Learning (BSL), an unsupervised learning approach, robust to noise and biases, that allows to incorporate prior medical knowledge into the learning process…

Machine Learning · Computer Science 2022-10-12 Elisa Ferrari , Luna Gargani , Greta Barbieri , Lorenzo Ghiadoni , Francesco Faita , Davide Bacciu

This report presents our participation to the WSDM Cup 2026 shared task on multilingual document retrieval from English queries. The task provides a challenging benchmark for cross-lingual generalization. It also provides a natural testbed…

Information Retrieval · Computer Science 2026-02-25 Thibault Formal , Maxime Louis , Hervé Déjean , Stéphane Clinchant

This paper presents the system description of our entry for the COLING 2025 RegNLP RIRAG (Regulatory Information Retrieval and Answer Generation) challenge, focusing on leveraging advanced information retrieval and answer generation…

Computation and Language · Computer Science 2024-12-10 Jebish Purbey , Drishti Sharma , Siddhant Gupta , Khawaja Murad , Siddartha Pullakhandam , Ram Mohan Rao Kadiyala

Tables are common and important in scientific documents, yet most text-based document search systems do not capture structures and semantics specific to tables. How to bridge different types of mismatch between keywords queries and…

Information Retrieval · Computer Science 2017-07-13 Kyle Yingkai Gao , Jamie Callan

Clinical Cohort Studies (CCS), such as randomized clinical trials, are a great source of documented clinical research. Ideally, a clinical expert inspects these articles for exploratory analysis ranging from drug discovery for evaluating…

Computation and Language · Computer Science 2023-02-02 Irfan Al-Hussaini , Davi Nakajima An , Albert J. Lee , Sarah Bi , Cassie S. Mitchell

Open-retrieval question answering systems are generally trained and tested on large datasets in well-established domains. However, low-resource settings such as new and emerging domains would especially benefit from reliable question…

Computation and Language · Computer Science 2022-01-28 Alon Albalak , Sharon Levy , William Yang Wang

Objective: This study aims to develop an end-to-end natural language processing pipeline for triage and diagnosis of COVID-19 from patient-authored social media posts, in order to provide researchers and public health practitioners with…

Computation and Language · Computer Science 2022-01-10 Abul Hasan , Mark Levene , David Weston , Renate Fromson , Nicolas Koslover , Tamara Levene

As the COVID-19 ravaging through the globe, accurate forecasts of the disease spread is crucial for situational awareness, resource allocation, and public health decision-making. Alternative to the traditional disease surveillance data…

Applications · Statistics 2021-11-04 Simin Ma , Shihao Yang

The entire world is engulfed in the fight against the COVID-19 pandemic, leading to a significant surge in research experiments, government policies, and social media discussions. A multi-modal information access and data visualization…

Information Retrieval · Computer Science 2020-12-01 Heer Ambavi , Kavita Vaishnaw , Udit Vyas , Abhisht Tiwari , Mayank Singh

Since the breakout of coronavirus disease (COVID-19), the computer-aided diagnosis has become a necessity to prevent the spread of the virus. Detecting COVID-19 at an early stage is essential to reduce the mortality risk of the patients. In…

Over the course of the COVID-19 pandemic, large volumes of biomedical information concerning this new disease have been published on social media. Some of this information can pose a real danger to people's health, particularly when false…

Computation and Language · Computer Science 2022-04-27 Isabelle Mohr , Amelie Wührl , Roman Klinger

In the past decade, many scientific news media that report scientific breakthroughs and discoveries emerged, bringing science and technology closer to the general public. However, not all scientific news article cites proper sources, such…

Information Retrieval · Computer Science 2022-05-03 Md Reshad Ul Hoque , Jiang Li , Jian Wu

When the novel coronavirus disease SARS-CoV2 (COVID-19) was officially declared a pandemic by the WHO in March 2020, the scientific community had already braced up in the effort of making sense of the fast-growing wealth of data gathered by…

Populations and Evolution · Quantitative Biology 2020-05-25 Timoteo Carletti , Duccio Fanelli , Francesco Piazza

This paper presents the model submitted by the NIT_COVID-19 team for identified informative COVID-19 English tweets at WNUT-2020 Task2. This shared task addresses the problem of automatically identifying whether an English tweet related to…

Computation and Language · Computer Science 2021-06-01 Jagadeesh M S , Alphonse P J A