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The global pandemic has made it more important than ever to quickly and accurately retrieve relevant scientific literature for effective consumption by researchers in a wide range of fields. We provide an analysis of several multi-label…

Information Retrieval · Computer Science 2020-09-11 Bernal Jiménez Gutiérrez , Juncheng Zeng , Dongdong Zhang , Ping Zhang , Yu Su

COVID-19 is a devastating respiratory and inflammatory illness caused by a new coronavirus that is rapidly spreading throughout the human population. Over the past 6 months, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the…

SARS-COV-2 is a positive single-strand RNA-based macromolecule that has caused the death of more than 6.3 million people since June 2022. Moreover, by disturbing global supply chains through lockdown, the virus has indirectly caused…

Biomolecules · Quantitative Biology 2022-11-01 Imra Aqeel , Abdul Majid

COVID-19 is a global health problem. Consequently, early detection and analysis of the infection patterns are crucial for controlling infection spread as well as devising a treatment plan. This work proposes a two-stage deep Convolutional…

Image and Video Processing · Electrical Eng. & Systems 2020-09-21 Saddam Hussain Khan , Anabia Sohail , Asifullah Khan , Yeon Soo Lee

We present a hybrid retrieval system for COVID-19 scientific literature, evaluated on the TREC-COVID benchmark (171,332 papers, 50 expert queries). The system implements six retrieval configurations spanning sparse (SPLADE), dense (BGE),…

Information Retrieval · Computer Science 2026-04-16 Harishkumar Kishorkumar Prajapati

The COVID-19 pandemic demands assimilation of all available biomedical knowledge to decode its mechanisms of pathogenicity and transmission. Despite the recent renaissance in unsupervised neural networks for decoding unstructured natural…

A prompt severity assessment model of patients confirmed for having infectious diseases could enable efficient diagnosis while alleviating burden on the medical system. This study aims to develop a SARS-CoV-2 severity assessment model and…

Machine Learning · Computer Science 2022-02-18 Min Sue Park , Hyeontae Jo , Haeun Lee , Se Young Jung , Hyung Ju Hwang

This study explores the use of deep learning techniques for analyzing lung Computed Tomography (CT) images. Classic deep learning approaches face challenges with varying slice counts and resolutions in CT images, a diversity arising from…

Image and Video Processing · Electrical Eng. & Systems 2024-03-19 Chih-Chung Hsu , Chia-Ming Lee , Yang Fan Chiang , Yi-Shiuan Chou , Chih-Yu Jiang , Shen-Chieh Tai , Chi-Han Tsai

This paper summarizes our approaches submitted to the case law retrieval task in the Competition on Legal Information Extraction/Entailment (COLIEE) 2022. Our methodology consists of four steps; in detail, given a legal case as a query, we…

Information Retrieval · Computer Science 2022-05-27 Arian Askari , Georgios Peikos , Gabriella Pasi , Suzan Verberne

Learning-to-rank (LTR) is a set of supervised machine learning algorithms that aim at generating optimal ranking order over a list of items. A lot of ranking models have been studied during the past decades. And most of them treat each…

Information Retrieval · Computer Science 2020-06-09 RuiXing Wang , Kuan Fang , RiKang Zhou , Zhan Shen , LiWen Fan

The COVID-19 pandemic has put immense pressure on health systems which are further strained due to the misinformation surrounding it. Under such a situation, providing the right information at the right time is crucial. There is a growing…

Computation and Language · Computer Science 2020-11-02 Ridam Pal , Rohan Pandey , Vaibhav Gautam , Kanav Bhagat , Tavpritesh Sethi

Scientific retrieval is essential for advancing scientific knowledge discovery. Within this process, document reranking plays a critical role in refining first-stage retrieval results. However, standard LLM listwise reranking faces…

Information Retrieval · Computer Science 2025-08-19 Runchu Tian , Xueqiang Xu , Bowen Jin , SeongKu Kang , Jiawei Han

Purpose: Finding scholarly articles is a time-consuming and cumbersome activity, yet crucial for conducting science. Due to the growing number of scholarly articles, new scholarly search systems are needed to effectively assist researchers…

Digital Libraries · Computer Science 2024-12-09 Allard Oelen , Mohamad Yaser Jaradeh , Sören Auer

Background: A critical step in effective care and treatment planning for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of the COVID-19 pandemic, is the assessment of the severity of disease progression. Chest…

Image and Video Processing · Electrical Eng. & Systems 2021-04-19 Alexander Wong , Zhong Qiu Lin , Linda Wang , Audrey G. Chung , Beiyi Shen , Almas Abbasi , Mahsa Hoshmand-Kochi , Timothy Q. Duong

We describe our participation in all five rounds of the TREC 2020 COVID Track (TREC-COVID). The goal of TREC-COVID is to contribute to the response to the COVID-19 pandemic by identifying answers to many pressing questions and building…

Information Retrieval · Computer Science 2020-11-04 Xue Jun Wang , Maura R. Grossman , Seung Gyu Hyun

In this paper, we report the results of our participation in the TREC-COVID challenge. To meet the challenge of building a search engine for rapidly evolving biomedical collection, we propose a simple yet effective weighted hierarchical…

Information Retrieval · Computer Science 2020-10-02 Michael Bendersky , Honglei Zhuang , Ji Ma , Shuguang Han , Keith Hall , Ryan McDonald

We present a new fact-checking benchmark, Check-COVID, that requires systems to verify claims about COVID-19 from news using evidence from scientific articles. This approach to fact-checking is particularly challenging as it requires…

Computation and Language · Computer Science 2023-05-30 Gengyu Wang , Kate Harwood , Lawrence Chillrud , Amith Ananthram , Melanie Subbiah , Kathleen McKeown

The world is currently experiencing an ongoing pandemic of an infectious disease named coronavirus disease 2019 (i.e., COVID-19), which is caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Computed Tomography (CT)…

Image and Video Processing · Electrical Eng. & Systems 2021-12-10 Qinghao Ye , Yuan Gao , Weiping Ding , Zhangming Niu , Chengjia Wang , Yinghui Jiang , Minhao Wang , Evandro Fei Fang , Wade Menpes-Smith , Jun Xia , Guang Yang

A significant percentage of COVID-19 survivors experience ongoing multisystemic symptoms that often affect daily living, a condition known as Long Covid or post-acute-sequelae of SARS-CoV-2 infection. However, identifying scientific…

Machine Learning · Computer Science 2022-10-31 Robert Leaman , Rezarta Islamaj , Alexis Allot , Qingyu Chen , W. John Wilbur , Zhiyong Lu

The number of unique terms in the scientific literature used to refer to either SARS-CoV-2 or COVID-19 is remarkably large and has continued to increase rapidly despite well-established standardized terms. This high degree of term variation…

Digital Libraries · Computer Science 2020-10-29 Robert Leaman , Zhiyong Lu