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We extend the classical SIR model of infectious disease spread to account for time dependence in the parameters, which also include diffusivities. The temporal dependence accounts for the changing characteristics of testing, quarantine and…

Populations and Evolution · Quantitative Biology 2020-07-03 Zhenlin Wang , Xiaoxuan Zhang , Gregory Teichert , Mariana Carrasco-Teja , Krishna Garikipati

As the COVID-19 ravaging through the globe, accurate forecasts of the disease spread is crucial for situational awareness, resource allocation, and public health decision-making. Alternative to the traditional disease surveillance data…

Applications · Statistics 2021-11-04 Simin Ma , Shihao Yang

Introduction. It is well known that social contact patterns differ from country to country. This variation coincides with significant socioeconomic heterogeneity that complicates the design of effective non-pharmaceutical interventions.…

Dynamical Systems · Mathematics 2023-03-31 Evans Kiptoo Korir , Zsolt Vizi

The aim of the paper is to describe a model of the development of the Covid-19 contamination of the population of a country or a region. For this purpose a special branching process with two types of individuals is considered. This model is…

Methodology · Statistics 2020-04-03 Nikolay M. Yanev , Vessela K. Stoimenova , Dimitar V. Atanasov

During the current COVID-19 pandemic, decision makers are tasked with implementing and evaluating strategies for both treatment and disease prevention. In order to make effective decisions, they need to simultaneously monitor various…

This technical report describes a dynamic causal model of the spread of coronavirus through a population. The model is based upon ensemble or population dynamics that generate outcomes, like new cases and deaths over time. The purpose of…

We present a timely and novel methodology that combines disease estimates from mechanistic models with digital traces, via interpretable machine-learning methodologies, to reliably forecast COVID-19 activity in Chinese provinces in…

Developing technology and changing lifestyles have made online grocery delivery applications an indispensable part of urban life. Since the beginning of the COVID-19 pandemic, the demand for such applications has dramatically increased,…

Machine Learning · Computer Science 2022-04-19 Aysun Bozanta , Sean Berry , Mucahit Cevik , Beste Bulut , Deniz Yigit , Fahrettin F. Gonen , Ayşe Başar

Human society under the COVID-19 pandemic can be viewed as a complex system, the evolution of which is characterized by such the parameters as the number of newly diseased, the number of seriously ill patients, the number of those who were…

Physics and Society · Physics 2024-01-03 Anatolii V. Mokshin , Yana A. Shadrina , Vladimir G. Sherputovskiy

Through Ecological Momentary Assessment (EMA) studies, a number of time-series data is collected across multiple individuals, continuously monitoring various items of emotional behavior. Such complex data is commonly analyzed in an…

Machine Learning · Computer Science 2023-10-12 Mandani Ntekouli , Gerasimos Spanakis , Lourens Waldorp , Anne Roefs

This study employed the MIMIC-IV database as data source to investigate the use of dynamic, high-frequency, multivariate time-series vital signs data, including temperature, heart rate, mean blood pressure, respiratory rate, and SpO2,…

Machine Learning · Computer Science 2023-07-13 Tongyue Shi , Zhilong Zhang , Wentie Liu , Junhua Fang , Jianguo Hao , Shuai Jin , Huiying Zhao , Guilan Kong

This paper extends the canonical model of epidemiology, SIRD model, to allow for time varying parameters for real-time measurement of the stance of the COVID-19 pandemic. Time variation in model parameters is captured using the generalized…

Populations and Evolution · Quantitative Biology 2021-02-11 Cem Cakmakli , Yasin Simsek

The aim of this paper is to analyse the evolution of the COVID-19 pandemic in Rio Grande do Sul by applying graph-theoretical tools, particularly spectral clustering techniques, on weighted graphs defined on the set of 167 municipalities in…

Social and Information Networks · Computer Science 2020-08-05 Luiz Emilio Allem , Carlos Hoppen , Matheus Micadei Marzo , Lucas Siviero Sibemberg

The ongoing COVID-19 pandemic continues to affect communities around the world. To date, almost 6 million people have died as a consequence of COVID-19, and more than one-quarter of a billion people are estimated to have been infected…

Analysing and understanding the transmission and evolution of the COVID-19 pandemic is mandatory to be able to design the best social and medical policies, foresee their outcomes and deal with all the subsequent socio-economic effects. We…

Populations and Evolution · Quantitative Biology 2025-07-28 Radu D. Stochiţoiu , Marian Petrica , Traian Rebedea , Ionel Popescu , Marius Leordeanu

Background: We estimate the overall quality of response to the Covid-19 pandemic in the first 18 months, using a small number of known parameters and a proposed method that is reasonably robust to the uncertainties in the data. Methods: The…

Physics and Society · Physics 2022-05-09 Thilakam Venkatapathi , Murugesan Venkatapathi

The coronavirus disease 2019 (COVID-19) pandemic radically impacts our lives, while the transmission/infection and recovery dynamics of COVID-19 remain obscure. A time-dependent Susceptible, Exposed, Infectious, and Recovered (SEIR) model…

Populations and Evolution · Quantitative Biology 2020-04-01 Yong Zhang , Xiangnan Yu , HongGuang Sun , Geoffrey R. Tick , Wei Wei , Bin Jin

Electronic records contain sequences of events, some of which take place all at once in a single visit, and others that are dispersed over multiple visits, each with a different timestamp. We postulate that fine temporal detail, e.g.,…

Machine Learning · Computer Science 2019-04-30 Mohammad Taha Bahadori , Zachary Chase Lipton

The death toll for Covid-19 may be reduced by dividing the population into two classes, the vulnerable and the fit, with different lockdown regimes. Instead of one reproduction number there now are four parameters. These make it possible to…

Populations and Evolution · Quantitative Biology 2020-10-05 Guus Balkema

Multivariate time series data come as a collection of time series describing different aspects of a certain temporal phenomenon. Anomaly detection in this type of data constitutes a challenging problem yet with numerous applications in…

Artificial Intelligence · Computer Science 2025-11-12 Jinbo Li , Hesam Izakian , Witold Pedrycz , Iqbal Jamal