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Neural architectures such as Recurrent Neural Networks (RNNs), Transformers, and State-Space Models have shown great success in handling sequential data by learning temporal dependencies. Decision Trees (DTs), on the other hand, remain a…

Machine Learning · Computer Science 2025-02-07 Sascha Marton , Moritz Schneider

Recognizing useful named entities plays a vital role in medical information processing, which helps drive the development of medical area research. Deep learning methods have achieved good results in medical named entity recognition (NER).…

Computation and Language · Computer Science 2022-11-10 Junzhe Jiang , Mingyue Cheng , Qi Liu , Zhi Li , Enhong Chen

Named entity recognition (NER) is a vital task in spoken language understanding, which aims to identify mentions of named entities in text e.g., from transcribed speech. Existing neural models for NER rely mostly on dedicated word-level…

Computation and Language · Computer Science 2019-09-24 Abdalghani Abujabal , Judith Gaspers

Successful Machine Learning based Named Entity Recognition models could fail on texts from some special domains, for instance, Chinese addresses and e-commerce titles, where requires adequate background knowledge. Such texts are also…

Computation and Language · Computer Science 2022-09-29 Xin Zhang , Yong Jiang , Xiaobin Wang , Xuming Hu , Yueheng Sun , Pengjun Xie , Meishan Zhang

In this paper, we propose a new strategy for the task of named entity recognition (NER). We cast the task as a query-based machine reading comprehension task: e.g., the task of extracting entities with PER is formalized as answering the…

Computation and Language · Computer Science 2019-11-05 Yuxian Meng , Xiaoya Li , Zijun Sun , Jiwei Li

Named entity recognition (NER) is highly sensitive to sentential syntactic and semantic properties where entities may be extracted according to how they are used and placed in the running text. To model such properties, one could rely on…

Computation and Language · Computer Science 2020-10-30 Yuyang Nie , Yuanhe Tian , Yan Song , Xiang Ao , Xiang Wan

The field of clinical natural language processing has been advanced significantly since the introduction of deep learning models. The self-supervised representation learning and the transfer learning paradigm became the methods of choice in…

Computation and Language · Computer Science 2020-04-27 Andrey Kormilitzin , Nemanja Vaci , Qiang Liu , Alejo Nevado-Holgado

In the domain of sequence modelling, Recurrent Neural Networks (RNN) have been capable of achieving impressive results in a variety of application areas including visual question answering, part-of-speech tagging and machine translation.…

Machine Learning · Computer Science 2018-05-22 Tharindu Fernando , Simon Denman , Aaron McFadyen , Sridha Sridharan , Clinton Fookes

Named Entity Recognition (NER) is a critical task in natural language processing, yet it remains particularly challenging for discontinuous entities. The primary difficulty lies in text segmentation, as traditional methods often missegment…

Computation and Language · Computer Science 2026-01-01 Wen-Fang Su , Hsiao-Wei Chou , Wen-Yang Lin

Previous work on clinical relation extraction from free-text sentences leveraged information about semantic types from clinical knowledge bases as a part of entity representations. In this paper, we exploit additional evidence by also…

Computation and Language · Computer Science 2025-03-10 Linh Le , Guido Zuccon , Gianluca Demartini , Genghong Zhao , Xia Zhang

Named entity recognition is a fundamental task in natural language processing, identifying the span and category of entities in unstructured texts. The traditional sequence labeling methodology ignores the nested entities, i.e. entities…

Computation and Language · Computer Science 2022-10-24 Xueru Wen , Changjiang Zhou , Haotian Tang , Luguang Liang , Yu Jiang , Hong Qi

Deep learning has yielded state-of-the-art performance on many natural language processing tasks including named entity recognition (NER). However, this typically requires large amounts of labeled data. In this work, we demonstrate that the…

Computation and Language · Computer Science 2018-02-06 Yanyao Shen , Hyokun Yun , Zachary C. Lipton , Yakov Kronrod , Animashree Anandkumar

Extracting detailed clinical information from free-text medical narratives remains a practical challenge for researchers and healthcare systems. Terminology for immune-mediated and infectious diseases is especially inconsistent across…

Computation and Language · Computer Science 2026-05-29 Veysel Kocaman , Gursev Pirge , Yigit Gul , Ace Vo , Zhenya Nargizyan , David Talby

Current state-of-the-art models for named entity recognition (NER) are neural models with a conditional random field (CRF) as the final layer. Entities are represented as per-token labels with a special structure in order to decode them…

Computation and Language · Computer Science 2020-10-12 Brian Lester , Daniel Pressel , Amy Hemmeter , Sagnik Ray Choudhury , Srinivas Bangalore

While transfer learning has become a ubiquitous technique used across Natural Language Processing (NLP) tasks, it is often unable to replicate the performance of pre-trained models on text of niche domains like Automotive. In this paper we…

Computation and Language · Computer Science 2021-12-02 Anmol Nayak , Hari Prasad Timmapathini

Recently, neural methods have achieved state-of-the-art (SOTA) results in Named Entity Recognition (NER) tasks for many languages without the need for manually crafted features. However, these models still require manually annotated…

Computation and Language · Computer Science 2019-11-25 M Saiful Bari , Shafiq Joty , Prathyusha Jwalapuram

Deep learning based image segmentation has achieved the state-of-the-art performance in many medical applications such as lesion quantification, organ detection, etc. However, most of the methods rely on supervised learning, which require a…

Computer Vision and Pattern Recognition · Computer Science 2020-04-20 Ruizhe Li , Dorothee Auer , Christian Wagner , Xin Chen

Clinical concept extraction often begins with clinical Named Entity Recognition (NER). Often trained on annotated clinical notes, clinical NER models tend to struggle with tagging clinical entities in user queries because of the structural…

Information Retrieval · Computer Science 2019-12-25 Yue Zhao , John Handley

In recent years, research has mainly focused on the general NER task. There still have some challenges with nested NER task in the specific domains. Specifically, the scenarios of low resource and class imbalance impede the wide application…

Computation and Language · Computer Science 2025-04-22 Jian Zhang , Tianqing Zhang , Qi Li , Hongwei Wang

Specialized transformer-based models for encoding tabular data have gained interest in academia. Although tabular data is omnipresent in industry, applications of table transformers are still missing. In this paper, we study how these…

Artificial Intelligence · Computer Science 2022-09-30 Aneta Koleva , Martin Ringsquandl , Mark Buckley , Rakebul Hasan , Volker Tresp