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Related papers: Automatic Textual Evidence Mining in COVID-19 Lite…

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We present COVID-SEE, a system for medical literature discovery based on the concept of information exploration, which builds on several distinct text analysis and natural language processing methods to structure and organise information in…

Background Medical and life science research generates millions of publications, and it is a great challenge for researchers to utilize this information in full since its scale and complexity greatly surpasses human reading capabilities.…

The abundance of literature related to the widespread COVID-19 pandemic is beyond manual inspection of a single expert. Development of systems, capable of automatically processing tens of thousands of scientific publications with the aim to…

Computation and Language · Computer Science 2020-11-11 Matej Martinc , Blaž Škrlj , Sergej Pirkmajer , Nada Lavrač , Bojan Cestnik , Martin Marzidovšek , Senja Pollak

The COVID-19 pandemic triggered a wave of novel scientific literature that is impossible to inspect and study in a reasonable time frame manually. Current machine learning methods offer to project such body of literature into the vector…

Information Retrieval · Computer Science 2021-10-19 Blaž Škrlj , Marko Jukič , Nika Eržen , Senja Pollak , Nada Lavrač

We are presenting COVID-19Base, a knowledgebase highlighting the biomedical entities related to COVID-19 disease based on literature mining. To develop COVID-19Base, we mine the information from publicly available scientific literature and…

We study the task of automatically finding evidence relevant to hypotheses in biomedical papers. Finding relevant evidence is an important step when researchers investigate scientific hypotheses. We introduce EvidenceBench to measure models…

Following the global COVID-19 pandemic, the number of scientific papers studying the virus has grown massively, leading to increased interest in automated literate review. We present a clinical text mining system that improves on previous…

Computation and Language · Computer Science 2020-12-09 Veysel Kocaman , David Talby

Generating inferential texts about an event in different perspectives requires reasoning over different contexts that the event occurs. Existing works usually ignore the context that is not explicitly provided, resulting in a…

Computation and Language · Computer Science 2020-06-16 Daya Guo , Duyu Tang , Nan Duan , Jian Yin , Daxin Jiang , Ming Zhou

Evidence plays a crucial role in automated fact-checking. When verifying real-world claims, existing fact-checking systems either assume the evidence sentences are given or use the search snippets returned by the search engine. Such methods…

Computation and Language · Computer Science 2024-01-30 Xuming Hu , Junzhe Chen , Zhijiang Guo , Philip S. Yu

The COVID-19 has brought about a significant challenge to the whole of humanity, but with a special burden upon the medical community. Clinicians must keep updated continuously about symptoms, diagnoses, and effectiveness of emergent…

Computation and Language · Computer Science 2020-12-02 Andres Carvallo , Denis Parra , Gabriel Rada , Daniel Perez , Juan Ignacio Vasquez , Camilo Vergara

Increasing number of COVID-19 research literatures cause new challenges in effective literature screening and COVID-19 domain knowledge aware Information Retrieval. To tackle the challenges, we demonstrate two tasks along withsolutions,…

Information Retrieval · Computer Science 2022-11-09 Arusarka Bose , Zili Zhou , Guandong Xu

The Covid-19 pandemic has caused a spur in the medical research literature. With new research advances in understanding the virus, there is a need for robust text mining tools which can process, extract and present answers from the…

Information Retrieval · Computer Science 2021-08-04 Souvik Das , Sougata Saha , Rohini K. Srihari

The extraction of relevant data from Electronic Health Records (EHRs) is crucial to identifying symptoms and automating epidemiological surveillance processes. By harnessing the vast amount of unstructured text in EHRs, we can detect…

Computation and Language · Computer Science 2025-02-10 Juliano Genari , Guilherme Tegoni Goedert

The novel coronavirus (SARS-CoV-2) which causes COVID-19 is an ongoing pandemic. There are ongoing studies with up to hundreds of publications uploaded to databases daily. We are exploring the use-case of artificial intelligence and natural…

Information Retrieval · Computer Science 2021-02-16 Yutong Jin , Jie Li , Xinyu Wang , Peiyao Li , Jinjiang Guo , Junfeng Wu , Dawei Leng , Lurong Pan

We present EviSearch, a multi-agent extraction system that automates the creation of ontology-aligned clinical evidence tables directly from native trial PDFs while guaranteeing per-cell provenance for audit and human verification.…

The development of AI-assisted chemical synthesis tools requires comprehensive datasets covering diverse reaction types, yet current high-throughput experimental (HTE) approaches are expensive and limited in scope. Chemical literature…

Information Retrieval · Computer Science 2025-07-01 Kexin Chen , Yuyang Du , Junyou Li , Hanqun Cao , Menghao Guo , Xilin Dang , Lanqing Li , Jiezhong Qiu , Pheng Ann Heng , Guangyong Chen

With the widespread consumption of AI-generated content, there has been an increased focus on developing automated tools to verify the factual accuracy of such content. However, prior research and tools developed for fact verification treat…

Computation and Language · Computer Science 2025-03-20 Varich Boonsanong , Vidhisha Balachandran , Xiaochuang Han , Shangbin Feng , Lucy Lu Wang , Yulia Tsvetkov

Research into COVID-19 is a big challenge and highly relevant at the moment. New tools are required to assist medical experts in their research with relevant and valuable information. The COVID-19 Open Research Dataset Challenge (CORD-19)…

Digital Libraries · Computer Science 2020-05-19 Hermann Kroll , Jan Pirklbauer , Johannes Ruthmann , Wolf-Tilo Balke

We present a system that allows life-science researchers to search a linguistically annotated corpus of scientific texts using patterns over dependency graphs, as well as using patterns over token sequences and a powerful variant of boolean…

Computation and Language · Computer Science 2020-06-09 Hillel Taub-Tabib , Micah Shlain , Shoval Sadde , Dan Lahav , Matan Eyal , Yaara Cohen , Yoav Goldberg

The entire world is engulfed in the fight against the COVID-19 pandemic, leading to a significant surge in research experiments, government policies, and social media discussions. A multi-modal information access and data visualization…

Information Retrieval · Computer Science 2020-12-01 Heer Ambavi , Kavita Vaishnaw , Udit Vyas , Abhisht Tiwari , Mayank Singh
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