Related papers: Optimal Reconstruction Codes for Deletion Channels
Consider two remote nodes (encoder and decoder), each with a binary sequence. The encoder's sequence $X$ differs from the decoder's sequence $Y$ by a small number of edits (deletions and insertions). The goal is to construct a message $M$,…
In this paper, we consider a synchronization problem between nodes $A$ and $B$ that are connected through a two--way communication channel. {Node $A$} contains a binary file $X$ of length $n$ and {node $B$} contains a binary file $Y$ that…
Nanopore sequencing, superior to other sequencing technologies for DNA storage in multiple aspects, has recently attracted considerable attention. Its high error rates, however, demand thorough research on practical and efficient coding…
We consider the zero-error capacity of deletion channels. Specifically, we consider the setting where we choose a codebook ${\cal C}$ consisting of strings of $n$ bits, and our model of the channel corresponds to an adversary who may delete…
Distributed storage systems often introduce redundancy to increase reliability. When coding is used, the repair problem arises: if a node storing encoded information fails, in order to maintain the same level of reliability we need to…
Fountain codes like LT or Raptor codes, also known as rateless erasure codes, allow to encode a message as some number of packets, such that any large enough subset of these packets is sufficient to fully reconstruct the message. It…
Compression refers to encoding data using bits, so that the representation uses as few bits as possible. Compression could be lossless: i.e. encoded data can be recovered exactly from its representation) or lossy where the data is…
We study the following semi-deterministic setting of the joint source-channel coding problem: a deterministic source sequence (a.k.a. individual sequence) is transmitted via a memoryless channel, using delay-limited encoder and decoder,…
We present a new lossy compressor for discrete sources. For coding a source sequence $x^n$, the encoder starts by assigning a certain cost to each reconstruction sequence. It then finds the reconstruction that minimizes this cost and…
This paper investigates the use of redundancy and self repairing against node failures in distributed storage systems, using various strategies. In replication method, access to one replication node is sufficient to reconstruct a lost node,…
The deletion channel is the simplest point-to-point communication channel that models lack of synchronization. Input bits are deleted independently with probability d, and when they are not deleted, they are not affected by the channel.…
Random linear network coding (RLNC) provides a powerful framework for non-coherent communication, where reliable transmission requires correcting errors and erasures induced by network mixing and motivates the use of subspace codes. In this…
Motivated by DNA storage systems and 3D fingerprinting, this work studies the adversarial torn paper channel with edit errors. This channel first applies at most $t_e$ edit errors (i.e., insertions, deletions, and substitutions) to the…
In the trace reconstruction problem, one attempts to reconstruct a fixed but unknown string $x$ of length $n$ from a given number of traces $\tilde{x}$ drawn iid from the application of a noisy process (such as the deletion channel) to $x$.…
This paper addresses fundamental challenges in two-dimensional error correction by constructing optimal codes for \emph{criss-cross deletions}. We consider an $ n \times n $ array $\boldsymbol{X}$ over a $ q $-ary alphabet $\Sigma_q := \{0,…
In the trace reconstruction problem, an unknown bit string $x \in \{0,1\}^n$ is observed through the deletion channel, which deletes each bit of $x$ with some constant probability $q$, yielding a contracted string $\widetilde{x}$. How many…
We consider the problem of communicating over a channel that breaks the message block into fragments of random lengths, shuffles them out of order, and deletes a random fraction of the fragments. Such a channel is motivated by applications…
In the trace reconstruction problem an unknown string ${\bf x}=(x_0,\dots,x_{n-1})\in\{0,1,...,m-1\}^n$ is observed through the deletion channel, which deletes each $x_k$ with a certain probability, yielding a contracted string…
Given a probability distribution $\mathcal{D}$ over the non-negative integers, a $\mathcal{D}$-repeat channel acts on an input symbol by repeating it a number of times distributed as $\mathcal{D}$. For example, the binary deletion channel…
An orientable sequence of order $n$ is a cyclic binary sequence such that each length-$n$ substring appears at most once \emph{in either direction}. Maximal length orientable sequences are known only for $n\leq 7$, and a trivial upper bound…