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Related papers: Optimal Reconstruction Codes for Deletion Channels

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In this monograph, we review recent advances in second-order asymptotics for lossy source coding, which provides approximations to the finite blocklength performance of optimal codes. The monograph is divided into three parts. In part I, we…

Information Theory · Computer Science 2024-10-25 Lin Zhou , Mehul Motani

Despite their significant advantages over competing technologies, nanopore sequencers are plagued by high error rates, due to physical characteristics of the nanopore and inherent noise in the biological processes. It is thus paramount not…

Information Theory · Computer Science 2025-10-27 Anisha Banerjee , Yonatan Yehezkeally , Antonia Wachter-Zeh , Eitan Yaakobi

Two of the most common models for channels with synchronisation errors are the Binary Deletion Channel with parameter $p$ ($\text{BDC}_p$) -- a channel where every bit of the codeword is deleted i.i.d with probability $p$, and the Poisson…

Information Theory · Computer Science 2022-06-20 Ittai Rubinstein

In the trace reconstruction problem, an unknown bit string ${\bf x}\in\{0,1 \}^n$ is sent through a deletion channel where each bit is deleted independently with some probability $q\in(0,1)$, yielding a contracted string $\widetilde{\bf…

Probability · Mathematics 2019-06-10 Nina Holden , Russell Lyons

Quantum noise is currently limiting efficient quantum information processing and computation. In this work, we consider the tasks of reconstructing and classifying quantum states corrupted by the action of an unknown noisy channel using…

Quantum Physics · Physics 2025-04-01 Angela Rosy Morgillo , Stefano Mangini , Marco Piastra , Chiara Macchiavello

We consider the problem of constructing a code capable of correcting a single long tandem duplication error of variable length. As the main contribution of this paper, we present a $q$-ary efficiently encodable code of length $n+1$ and…

Information Theory · Computer Science 2023-04-26 Daniil Goshkoder , Nikita Polyanskii , Ilya Vorobyev

Regenerating codes are a class of codes for distributed storage networks that provide reliability and availability of data, and also perform efficient node repair. Another important aspect of a distributed storage network is its security.…

Information Theory · Computer Science 2015-03-19 Nihar B. Shah , K. V. Rashmi , P. Vijay Kumar

Motivated by polymer-based data-storage platforms that use chains of binary synthetic polymers as the recording media and read the content via tandem mass spectrometers, we propose a new family of codes that allows for both unique string…

Information Theory · Computer Science 2021-06-29 Srilakshmi Pattabiraman , Ryan Gabrys , Olgica Milenkovic

The prevalent technique for DNA sequencing consists of two main steps: shotgun sequencing, where many randomly located fragments, called reads, are extracted from the overall sequence, followed by an assembly algorithm that aims to…

Genomics · Quantitative Biology 2016-01-28 Shirshendu Ganguly , Elchanan Mossel , Miklos Z. Racz

The current paper is a study in Recurrent Neural Networks (RNN), motivated by the lack of examples simple enough so that they can be thoroughly understood theoretically, but complex enough to be realistic. We constructed an example of…

Machine Learning · Statistics 2019-11-26 Marek Rychlik

In order to provide high data reliability, distributed storage systems disperse data with redundancy to multiple storage nodes. Regenerating codes is a new class of erasure codes to introduce redundancy for the purpose of improving the data…

Information Theory · Computer Science 2015-03-18 Kenneth W. Shum , Yuchong Hu

We consider the problem of binary string reconstruction from the multiset of its substring compositions, i.e., referred to as the substring composition multiset, first introduced and studied by Acharya et al. We introduce a new algorithm…

Information Theory · Computer Science 2023-06-05 Utkarsh Gupta , Hessam Mahdavifar

Error correction codes are a crucial part of the physical communication layer, ensuring the reliable transfer of data over noisy channels. The design of optimal linear block codes capable of being efficiently decoded is of major concern,…

Information Theory · Computer Science 2024-05-08 Yoni Choukroun , Lior Wolf

We improve the upper bound of Levenshtein for the cardinality of a code of length 4 capable of correcting single deletions over an alphabet of even size. We also illustrate that the new upper bound is sharp. Furthermore we will construct an…

Information Theory · Computer Science 2010-03-23 Hyun Kwang Kim , Joon Yop Lee , Dong Yeol Oh

We develop novel protocols for generating loss-tolerant quantum codes; these are central for safeguarding information against qubit losses, with most crucial applications in quantum communications. Contrary to current proposals, our method…

Quantum Physics · Physics 2025-03-31 Francesco Cesa , Tommaso Feri , Angelo Bassi

For reliable transmission across a noisy communication channel, classical results from information theory show that it is asymptotically optimal to separate out the source and channel coding processes. However, this decomposition can fall…

Machine Learning · Computer Science 2019-05-15 Kristy Choi , Kedar Tatwawadi , Aditya Grover , Tsachy Weissman , Stefano Ermon

We consider a real-time communication system with noisy feedback consisting of a Markov source, a forward and a backward discrete memoryless channels, and a receiver with finite memory. The objective is to design an optimal communication…

Information Theory · Computer Science 2007-09-25 Aditya Mahajan , Demosthenis Teneketzis

This paper presents an efficient algorithm for robust network reconstruction of Linear Time-Invariant (LTI) systems in the presence of noise, estimation errors and unmodelled nonlinearities. The method here builds on previous work on robust…

Dynamical Systems · Mathematics 2016-11-18 David Hayden , Ye Yuan , Jorge Gonçalves

We investigate the amount of primordial information that can be reconstructed from spectroscopic galaxy surveys, as well as what sets the noise in reconstruction at low wavenumbers, by studying a simplified universe in which galaxies are…

Cosmology and Nongalactic Astrophysics · Physics 2021-06-23 Matthew McQuinn

We present two new algorithms for the reconstruction of turbo codes from a noisy intercepted bitstream. With these algorithms, we were able to reconstruct various turbo codes with realistic parameter sizes. To the best of our knowledge,…

Information Theory · Computer Science 2015-03-17 Mathieu Cluzeau , Matthieu Finiasz , Jean-Pierre Tillich